Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M02
         (909 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.       31   4.4  
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.     31   4.4  
AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.  ...    31   7.6  

>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
          Length = 1192

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 12/80 (15%)
 Frame = -1

Query: 657 FPXFXPXFXGNPFXPPXXXKXPFP-----HPXPXVXXFFXEKTXXAPKKXNP----FPPG 505
           FP   P     P  PP   + PFP     HP P V   F       P   NP     PPG
Sbjct: 81  FPPPMPPSAQGPL-PPCPIRPPFPNHQMRHPFP-VPPCFPPMPPPMPCPNNPPVPGAPPG 138

Query: 504 XAVFXXQKXP---PXPPPXP 454
              F     P   P PPP P
Sbjct: 139 QGTFPFMMPPPSMPHPPPPP 158


>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
          Length = 1374

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 12/80 (15%)
 Frame = -1

Query: 657 FPXFXPXFXGNPFXPPXXXKXPFP-----HPXPXVXXFFXEKTXXAPKKXNP----FPPG 505
           FP   P     P  PP   + PFP     HP P V   F       P   NP     PPG
Sbjct: 81  FPPPMPPSAQGPL-PPCPIRPPFPNHQMRHPFP-VPPCFPPMPPPMPCPNNPPVPGAPPG 138

Query: 504 XAVFXXQKXP---PXPPPXP 454
              F     P   P PPP P
Sbjct: 139 QGTFPFMMPPPSMPHPPPPP 158


>AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.
           ).).
          Length = 232

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 16/57 (28%), Positives = 21/57 (36%)
 Frame = -1

Query: 624 PFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           P   P   + PF HP      ++ +     P+   P PP          PP PPP P
Sbjct: 116 PTTRPPPIRPPFSHPLSAHLPWYFQPP---PRPLPPRPPAAQPRPPPSPPPPPPPPP 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,420,348
Number of Sequences: 237096
Number of extensions: 929276
Number of successful extensions: 3261
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)