Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M02
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    30   2.6  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    30   2.6  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    30   2.6  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical
           protein C54G4.4 protein.
          Length = 868

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/67 (28%), Positives = 21/67 (31%)
 Frame = -1

Query: 654 PXFXPXFXGNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXP 475
           P   P    NP  PP     P P P   +  F  E     P    P+ P          P
Sbjct: 785 PSLPPSMLFNPSIPP-----PSPTPSQILYSFDHEPIYDTPPDTIPYQPESVYERLPDRP 839

Query: 474 PXPPPXP 454
             PPP P
Sbjct: 840 APPPPIP 846


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = -1

Query: 675 HXXXXFFPXFXPXFXGNPFXPPXXXKXP--FPHPXPXVXXFFXEKTXXAPKKXNPFPPGX 502
           H    F P   P   G+   PP     P  FP P P V           P       P  
Sbjct: 104 HQPPSFSPATQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARP-- 161

Query: 501 AVFXXQKXPPXPPPXP 454
           A F   + PP P P P
Sbjct: 162 APFPAAQPPPAPTPTP 177


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/59 (28%), Positives = 18/59 (30%)
 Frame = -1

Query: 630 GNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           G P   P     P P P P         +   P    P P G         PP PPP P
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/59 (28%), Positives = 18/59 (30%)
 Frame = -1

Query: 630 GNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           G P   P     P P P P         +   P    P P G         PP PPP P
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
 Frame = -1

Query: 615 PPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNP--FPPGXAVFXXQKXPPXPPPXP 454
           PP   + P PHP P    F  + T   P +  P   PPG         PP PP  P
Sbjct: 660 PPPNIQPPVPHPPPMGFPFQHQLT-QLPGQPRPAGLPPGVPPMFNLNAPP-PPGIP 713


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/54 (29%), Positives = 19/54 (35%)
 Frame = -1

Query: 615 PPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           PP   + P P P P        +   +P    P PP          PP PPP P
Sbjct: 474 PPPPSRIPNPSPSPQ-----PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = -1

Query: 615 PPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           PP     P PH  P +     E T  +     P PP          PP PPP P
Sbjct: 765 PPPPPPPPPPHCEPTMVHV--EFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = -1

Query: 615 PPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           PP     P PH  P +     E T  +     P PP          PP PPP P
Sbjct: 765 PPPPPPPPPPHCEPTMVHV--EFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,968,505
Number of Sequences: 27780
Number of extensions: 112692
Number of successful extensions: 307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)