Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L24
(962 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 55 2e-07
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 55 2e-07
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 55 2e-07
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 48 3e-05
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 47 4e-05
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 29 9.5
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/82 (40%), Positives = 37/82 (45%)
Frame = +3
Query: 267 GMKIXXEGLKGRVXEVXXXDX*FXXXXERXXXKXRLXXEYVXGXNVXXXXXGMXXXXDKX 446
G +I + LKGRV EV D ER K RL E V NV GM DK
Sbjct: 54 GQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKY 113
Query: 447 RWMVKKWXXXXEXXIDVKXXDG 512
R MVKKW E ++ K DG
Sbjct: 114 RSMVKKWQTLIEAIVEAKTVDG 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 115 VGKNKXXXXXXXXXXXXXIVXXXXXKDWXDVKXXXMXXKRXVGXXXV 255
VGKNK +V KDW DVK M R +G V
Sbjct: 3 VGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLV 49
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/82 (40%), Positives = 37/82 (45%)
Frame = +3
Query: 267 GMKIXXEGLKGRVXEVXXXDX*FXXXXERXXXKXRLXXEYVXGXNVXXXXXGMXXXXDKX 446
G +I + LKGRV EV D ER K RL E V NV GM DK
Sbjct: 54 GQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKY 113
Query: 447 RWMVKKWXXXXEXXIDVKXXDG 512
R MVKKW E ++ K DG
Sbjct: 114 RSMVKKWQTLIEAIVEAKTVDG 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 115 VGKNKXXXXXXXXXXXXXIVXXXXXKDWXDVKXXXMXXKRXVGXXXV 255
VGKNK +V KDW DVK M R +G V
Sbjct: 3 VGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLV 49
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/82 (40%), Positives = 37/82 (45%)
Frame = +3
Query: 267 GMKIXXEGLKGRVXEVXXXDX*FXXXXERXXXKXRLXXEYVXGXNVXXXXXGMXXXXDKX 446
G +I + LKGRV EV D ER K RL E V NV GM DK
Sbjct: 54 GQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKY 113
Query: 447 RWMVKKWXXXXEXXIDVKXXDG 512
R MVKKW E ++ K DG
Sbjct: 114 RSMVKKWQTLIEAIVEAKTVDG 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 115 VGKNKXXXXXXXXXXXXXIVXXXXXKDWXDVKXXXMXXKRXVGXXXV 255
VGKNK +V KDW DVK M R +G V
Sbjct: 3 VGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLV 49
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 47.6 bits (108), Expect = 3e-05
Identities = 29/72 (40%), Positives = 31/72 (43%)
Frame = +3
Query: 297 GRVXEVXXXDX*FXXXXERXXXKXRLXXEYVXGXNVXXXXXGMXXXXDKXRWMVKKWXXX 476
GRV EV D ER K RL E V NV GM DK R MVKKW
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 477 XEXXIDVKXXDG 512
E ++ K DG
Sbjct: 74 IEAIVEAKTVDG 85
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 46.8 bits (106), Expect = 4e-05
Identities = 31/83 (37%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 267 GMKIXXEGLKGRVXEVXXX-DX*FXXXXERXXXKXRLXXEYVXGXNVXXXXXGMXXXXDK 443
G +I + KGRV EV D E K RL E V NV GM DK
Sbjct: 54 GQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDK 113
Query: 444 XRWMVKKWXXXXEXXIDVKXXDG 512
R MVKKW E ++ K DG
Sbjct: 114 YRSMVKKWQTLIEAIVEAKTVDG 136
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 115 VGKNKXXXXXXXXXXXXXIVXXXXXKDWXDVKXXXMXXKRXVGXXXV 255
VGKNK +V KDW DVK M R +G V
Sbjct: 3 VGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLV 49
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 423 MXXXXDKXRWMVKKWXXXXEXXIDVKXXDG 512
M DK R MVKKW E ++ K DG
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDG 30
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,234,824
Number of Sequences: 53049
Number of extensions: 45339
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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