Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L22
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.44
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.44
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.3
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 30 2.3
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.4
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 29 5.4
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 28 7.1
04_03_0803 - 19835284-19836050,19836337-19836418 28 7.1
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 7.1
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 28 9.4
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.3 bits (70), Expect = 0.44
Identities = 28/115 (24%), Positives = 28/115 (24%), Gaps = 1/115 (0%)
Frame = +3
Query: 348 PRAPPXXXXGPXFLKKP-PXXFXXKXXXXXXPPXXXGGGGXXXXXGGAPPXPPXRXXXXX 524
P APP P P P PP G GAPP PP
Sbjct: 273 PAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPA 332
Query: 525 XKKKKXLFFXXXKKXXGGRXPPPPPXXXXXXXXXXXXXXXGGXPPPXKKXXGXXG 689
G PPPPP G PPP G G
Sbjct: 333 PPPPAP----SPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGG 383
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = +2
Query: 422 PXXXXXPPXXGXGGXXXXGGGGPPPPXXXXXXXFXXKKKXPFFXPXKKXGXGAXPPPPPX 601
P PP G G G G PPPP P G G+ PPPPP
Sbjct: 303 PPPHPLPPGAGAGA----GTGAPPPPPAHPAAP----APPPPAPSPSAAGAGSGPPPPPP 354
Query: 602 XXXXXXXXXXXXXXGGXPPP 661
G PPP
Sbjct: 355 PAAPAAPRPPGPGPGPPPPP 374
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 440 PPXXGXGGXXXXGGGGPPPP 499
PP G G GGGGPPPP
Sbjct: 371 PPPPGAAGR---GGGGPPPP 387
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +2
Query: 488 PPPPXXXXXXXFXXKKKXPFFXPXKKXGXGAXPPPPPXXXXXXXXXXXXXXXGGXPPPXX 667
PPPP K P P G PPPPP GG PPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGP---PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Query: 668 K 670
K
Sbjct: 383 K 383
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 184 PPGXXGPXNXPFXKKXXXKIXXKFXLPXKKXPPXXKKVGXAPXFPRG*KKKKXXXPGXP 360
PP GP P K K P PP KK G P P+G + PG P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 488 PPPPXXXXXXXFXXKKKXPFFXPXKKXGXGAXPPPPP 598
PPPP F P F P PPPPP
Sbjct: 290 PPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 438 PPXXXGGGGXXXXXGGAPPXPPXR 509
PP GGGG G PP PP R
Sbjct: 19 PPPQAGGGGGGEFYRGPPPQPPMR 42
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 348 PRAPPXXXXGPXFLKKPPXXFXXKXXXXXXPPXXXGGGGXXXXXGGAPPXPP 503
PR PP G PP PP GG GAPP PP
Sbjct: 293 PRIPPPPVGGTQ--PPPPPPPLANGPPRSIPPPPMTGGAMANFTPGAPPRPP 342
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 532 KKXXFFXXXKKKXXGGAXPPPPP 600
KK F K+ GG PPPPP
Sbjct: 777 KKVEHFLGIKRSAQGGGLPPPPP 799
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -2
Query: 489 GPPPPXXXX--PPXPXXGGXXXXXGXXXXKXGGVFLKXGGXPXKXGXPG 349
GPPPP PP P G G GG+ + GG G G
Sbjct: 166 GPPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGGYDPGYGGMG 214
>04_03_0803 - 19835284-19836050,19836337-19836418
Length = 282
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 502 GGXGGAPPXXXXXPPPPXXXGG 437
G GG PP PPPP GG
Sbjct: 215 GWCGGQPPINCPPPPPPSRCGG 236
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 498 GGGGPPPPXXXXPPXP 451
GGGG PPP PP P
Sbjct: 1193 GGGGSPPPSHGSPPAP 1208
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +2
Query: 491 PPPXXXXXXXFXXKKKXPFFXPXKKXGXGAXPPPPP 598
PPP KK F P + PPPPP
Sbjct: 26 PPPSLPLPSALMPPKKRRLFTPAPRHAATPPPPPPP 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,650,000
Number of Sequences: 37544
Number of extensions: 475126
Number of successful extensions: 1718
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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