Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L21
(934 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 3.8
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 3.8
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 27 3.8
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 27 3.8
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 27 3.8
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 27 3.8
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 3.8
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 27 3.8
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 27 3.8
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 27 3.8
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 3.8
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 27 5.0
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 8.7
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 253 VSQLNXDDEYYKIGKDYDIEMNMGQLH--*TRKAVEEFLKMYRDWFNA*EFRSSPF 414
+SQ + DD+YY +G Y +M+ QL+ + K + +K + W + E PF
Sbjct: 723 LSQKHDDDKYYPVGY-YSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 705 SCGFRINEAILHXCYVNFLQHXP 637
SC F+I++ ILH VN ++H P
Sbjct: 119 SCKFQISQRILHNGDVNRVRHMP 141
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 261 LAHILGRKNRIFFCFFNK 208
LA +LG +FFCFF K
Sbjct: 30 LAFLLGASACVFFCFFRK 47
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,068,630
Number of Sequences: 5004
Number of extensions: 58543
Number of successful extensions: 136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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