Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L21
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    30   3.0  
11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257     30   3.0  
01_06_0472 - 29592383-29592457,29592720-29592840,29592971-295930...    30   3.0  
01_05_0333 + 21064693-21066006                                         29   7.0  
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    28   9.2  

>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 482 ETFYKTACFARVHLNQGQFLYAF 550
           ETF+ TAC  R HL QG+ + A+
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAY 449


>11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257
          Length = 921

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 467 YAKDFETFYKTACFARVHLNQGQFLYAFYIAVIPA 571
           Y KD   FY  +   +  + +G+FL +FY+ + P+
Sbjct: 697 YVKDSRLFYSFSESTKELVQEGEFLQSFYVQIAPS 731


>01_06_0472 -
           29592383-29592457,29592720-29592840,29592971-29593056,
           29593224-29593310,29593493-29593573,29593656-29593803,
           29593987-29594054,29594145-29594402
          Length = 307

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +1

Query: 178 KDQKNVGCPLFVEKAKENPVLSPKNVSQLNXDDEYYKIGKDYDIEMNMGQLH*TRKAVEE 357
           K +K VG  +  ++ K NPVL+   V  LN + +       +D+  N+  +    K ++ 
Sbjct: 167 KQEKIVGMGMNEDELKRNPVLTEYVVQDLNVNPKLPFEDNTFDVITNVVSVDYLTKPIDV 226

Query: 358 FLKMYR 375
           F +M R
Sbjct: 227 FKEMRR 232


>01_05_0333 + 21064693-21066006
          Length = 437

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 100 VLNSWAWGLVA---RRAQQVQLPKARAPIKDQKNVGCPLFVEKAKENPVLSPKNVSQL 264
           + N  AWG  A   RR    Q P+ RAP+  Q+  G P+  ++   + V S    S+L
Sbjct: 371 ISNGRAWGSQAANMRRGSSEQ-PRERAPLHQQRRAGRPVNSQRPTGDMVRSSGRASRL 427


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +1

Query: 499 CLFCACASQSRSILVCLLHRC 561
           CLFC     SR ILVC L RC
Sbjct: 58  CLFCEANFISRRILVCDLLRC 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,829
Number of Sequences: 37544
Number of extensions: 359404
Number of successful extensions: 716
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)