Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L20
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8134| Best HMM Match : TPR_3 (HMM E-Value=1.3) 109 4e-24
SB_42056| Best HMM Match : TPR_3 (HMM E-Value=1.3) 85 5e-17
SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13) 36 0.057
SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4) 31 1.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_41565| Best HMM Match : Tet_res_leader (HMM E-Value=7.5) 29 3.8
SB_15572| Best HMM Match : Planc_extracel (HMM E-Value=9.3) 29 3.8
SB_26058| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 29 5.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 8.7
SB_44863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_8134| Best HMM Match : TPR_3 (HMM E-Value=1.3)
Length = 399
Score = 109 bits (261), Expect = 4e-24
Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = +3
Query: 324 IDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRD 503
+D+ D+ + LYP+E+ P ++++R V+ EL++LQ EP+ I D
Sbjct: 6 VDFAMDVYKGLYPDEEVPTSLVEKRVEVVKELKDLQAQTEPI------------INCFSD 53
Query: 504 PKTLINHLSTNKEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLS 683
P+ + K EM+D +Y+ AK++YECGNY +A YLYF + + D N L+
Sbjct: 54 PEFTA---------QIKPEMLDVLYKFAKFQYECGNYSGAAEYLYFYRALAPGGDTNSLN 104
Query: 684 VLWGKLAXEILXXNWDGALDDLTKXREFIDXG-GAGPL 794
LWGKLA EIL NWD AL+DL + ++ I+ AG L
Sbjct: 105 ALWGKLASEILMQNWDTALEDLNRLKDVIESNTSAGTL 142
>SB_42056| Best HMM Match : TPR_3 (HMM E-Value=1.3)
Length = 215
Score = 85.4 bits (202), Expect = 5e-17
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 561 MIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLAXEILXXNWDGAL 740
M+D +Y+ AK++YECGNY +A YLYF + + D N L+ LWGKLA EIL NWD AL
Sbjct: 1 MLDVLYKFAKFQYECGNYSGAAEYLYFYRALAPGGDTNSLNALWGKLASEILMQNWDTAL 60
Query: 741 DDLTKXREFID 773
+DL + ++ I+
Sbjct: 61 EDLNRLKDVIE 71
>SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13)
Length = 829
Score = 35.5 bits (78), Expect = 0.057
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 438 VEPVLRLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRLAKYRYECGNYV 617
+E ++L + V +T T + L N L KEY+ +E+ YRL K R G +
Sbjct: 708 MEKAIKLQKELGVGETEHTATFQRNLANVLLALKEYDLALEVAQESYRLRKER--LGTHP 765
Query: 618 ESASYLYFCQLV 653
E+A LY ++
Sbjct: 766 ETARILYMIGVI 777
>SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 330 YVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKT 485
Y+ D ++YP DT EII + V + ++E + + VL ++R+ + KT
Sbjct: 215 YLVDCPGVVYPTGDTETEIILKGVVRVENVKEAAEHIPTVLERVKREYLAKT 266
>SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4)
Length = 801
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 348 RMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLR-LMQRDDVMKTIETMRDPKTLINH 524
R LYPE + + + V + ELQ A+ R L+++ + TI + D KTL+ H
Sbjct: 511 RELYPETEPAGLFVAKVDVSEVPMAELQAALPAFERQLLRKGYGLYTISGVLDRKTLVEH 570
Query: 525 LSTNKEYEFKIEMIDSM 575
L ++ + + ++ +M
Sbjct: 571 LCASEGFREQGDLAAAM 587
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +3
Query: 390 QRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK-TLINHLST-----NKEYEF 551
+R +L +++EL V+ + + +++ ++K ++ + D K TLI +T NKE+E
Sbjct: 1855 EREKELLQQVEELSTQVKTLEQRIEQLVIVK-MDALHDQKATLIEEHNTAIEKLNKEHEA 1913
Query: 552 KIEMIDSMYR 581
K+E ++ +Y+
Sbjct: 1914 KLESVERLYK 1923
>SB_41565| Best HMM Match : Tet_res_leader (HMM E-Value=7.5)
Length = 58
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 525 LSTNKEYEFKIEMIDSMYRLAKYRYECGNYVES 623
+S N YE K++ S RLAK+R+ +Y E+
Sbjct: 15 MSCNSSYEAKLKRSSSRMRLAKHRHILHHYTEN 47
>SB_15572| Best HMM Match : Planc_extracel (HMM E-Value=9.3)
Length = 45
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 525 LSTNKEYEFKIEMIDSMYRLAKYRYECGNYVES 623
+S N YE K++ S RLAK+R+ +Y E+
Sbjct: 2 MSCNSSYEVKLKRSKSRMRLAKHRHILHHYTEN 34
>SB_26058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 525 LSTNKEYEFKIEMIDSMYRLAKYRYECGNYVES 623
LS N YE K++ S RLAK+R+ +Y E+
Sbjct: 37 LSCNLNYEAKLKRSKSRLRLAKHRHILHHYTEN 69
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Frame = +3
Query: 363 EEDTPEEIIQRRGVVLSE--LQELQDAVEPVLRL------MQRDDVMKTIETMRDPKTLI 518
EED E+ I + LQEL++ VE + R RDD+ K ET+ K ++
Sbjct: 1215 EEDEEEDAIYEETIEKQNKRLQELKEEVENLKRKNGIEEKRLRDDINKLSETLEKEKRMV 1274
Query: 519 NHL---STNKEYEFK 554
N L +T ++ +F+
Sbjct: 1275 NQLKNEATEQKNDFR 1289
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 255 AKETYDQSELLQAKLEILSKXNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQD 434
A+ET + + LQ K K + + ++D+ + EE+ + + + +L E+Q+L+D
Sbjct: 934 AQETEEMRQRLQTK-----KNELEELLSDLEGRITEEEENVLALTEDKKKLLKEIQDLED 988
Query: 435 AVE 443
++E
Sbjct: 989 SLE 991
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/94 (21%), Positives = 41/94 (43%)
Frame = +3
Query: 405 VLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRL 584
++ +++ELQ+ E QR+D + E +R +L+ + E +M + +
Sbjct: 2663 LIQQMRELQNQSEKYRFQKQREDCEREKEHLRQQVSLMRSKGNTQSEELIQQMRELQNQS 2722
Query: 585 AKYRYECGNYVESASYLYFCQLVMSPTDKNYLSV 686
KYR++ + S + MSP ++ V
Sbjct: 2723 EKYRFQVDDLTRQLSRK---DITMSPQSQSRTEV 2753
>SB_44863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 449 YWLYCILKFLQFRKNYTSPLYNFFRSVFFRIEHSSDVSNI 330
Y+L+CIL+ L+ KNY + F F ++H+ +S +
Sbjct: 57 YFLHCILESLKRGKNYVRIFFADFSKGFDLVDHNVLMSEL 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,699,708
Number of Sequences: 59808
Number of extensions: 392624
Number of successful extensions: 919
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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