Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L17
(928 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:... 108 2e-22
UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF... 86 1e-15
UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopteryg... 82 2e-14
UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep: Re... 81 4e-14
UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila pseudoobscu... 81 4e-14
UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep: Re... 80 7e-14
UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus fa... 79 1e-13
UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep: R... 78 3e-13
UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep... 77 6e-13
UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep: ... 76 1e-12
UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L - ... 75 3e-12
UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo ... 75 3e-12
UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep: Re... 75 3e-12
UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep: Re... 74 6e-12
UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulo... 73 1e-11
UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2... 73 1e-11
UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome s... 72 2e-11
UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep: ... 64 5e-09
UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon ... 63 8e-09
UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whol... 63 1e-08
UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep: R... 56 1e-06
UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella ve... 54 7e-06
UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep: Reticu... 50 1e-04
UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep: Reticul... 49 1e-04
UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xeno... 48 5e-04
UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep: Ret... 40 0.068
UniRef50_UPI0000E822BE Cluster: PREDICTED: similar to RTN3w; n=1... 39 0.21
UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 prote... 38 0.48
>UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:
Reticulon/nogo - Aedes aegypti (Yellowfever mosquito)
Length = 493
Score = 108 bits (260), Expect = 2e-22
Identities = 62/145 (42%), Positives = 75/145 (51%)
Frame = +3
Query: 180 AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
AWF P++LHP VESLIYWR+
Sbjct: 291 AWFKPEKLHPVVESLIYWRDVKKSGAVFGAGLTILIAMSLFSLISVFSYVSLLALFGTVS 350
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YKNVLQAVQKT++GHPFK L+ TLS + + H+ A L L LFL
Sbjct: 351 FRIYKNVLQAVQKTSEGHPFKEYLDTDL-TLSQEKVQ-QLSTVAVAHVNALLTELRRLFL 408
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DS+ FGV+L+CLTYVGA FN
Sbjct: 409 VEDLVDSIKFGVVLYCLTYVGAIFN 433
>UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF,
isoform F; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33113-PF, isoform F - Tribolium castaneum
Length = 479
Score = 85.8 bits (203), Expect = 1e-15
Identities = 53/134 (39%), Positives = 63/134 (47%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
VESLIYWR+ FR+YKN++QAV
Sbjct: 288 VESLIYWRDPKKSGPVFGGVLLVLLALTYFSLISVVAYLSLLGLTGTISFRIYKNIVQAV 347
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKT DGHPFK LLE +L + H+ A + L LFL EDL DS+ FG
Sbjct: 348 QKTGDGHPFKDLLEFDV-SLPQEKVK-EVSEVAVAHINAAVVELRRLFLVEDLVDSIKFG 405
Query: 573 VLLWCLTYVGACFN 614
VLLW LTY+GA FN
Sbjct: 406 VLLWTLTYLGAWFN 419
>UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11;
Endopterygota|Rep: CG33113-PF, isoform F - Drosophila
melanogaster (Fruit fly)
Length = 595
Score = 81.8 bits (193), Expect = 2e-14
Identities = 51/134 (38%), Positives = 61/134 (45%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
VESLIYWR+ FR+YK+V QAV
Sbjct: 399 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 458
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKTN+GHPFK LE TLS + H+ + L LFL ED+ DS+ FG
Sbjct: 459 QKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 516
Query: 573 VLLWCLTYVGACFN 614
V+LW TYVGA FN
Sbjct: 517 VILWVFTYVGAWFN 530
>UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep:
Reticulon 4-l - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 322
Score = 81.0 bits (191), Expect = 4e-14
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK +LQAVQK+ DGHPFK L+ + T ++ H+ + L LFL
Sbjct: 184 FRIYKGILQAVQKSEDGHPFKMYLD--KDTALPAEMVHKYSDSTLVHINTVIKELRRLFL 241
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL F VL+W LTYVGA FN
Sbjct: 242 VEDLVDSLKFAVLMWILTYVGALFN 266
>UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila
pseudoobscura|Rep: GA17292-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 547
Score = 81.0 bits (191), Expect = 4e-14
Identities = 51/134 (38%), Positives = 60/134 (44%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
VESLIYWR+ FR+YK+V QAV
Sbjct: 351 VESLIYWRDVKKSGIVFGAGLITLVAISSFSVISVFAYLSLLALFGTVAFRIYKSVTQAV 410
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKT+DGHPFK LE TLS + H+ L LFL EDL DS+ FG
Sbjct: 411 QKTSDGHPFKEYLELDL-TLSQEKVQ-NIAGVAVAHINGFTAELRRLFLVEDLIDSIKFG 468
Query: 573 VLLWCLTYVGACFN 614
V+LW TY+GA FN
Sbjct: 469 VILWVFTYIGAWFN 482
>UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep:
Reticulon-1 - Homo sapiens (Human)
Length = 776
Score = 80.2 bits (189), Expect = 7e-14
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+VLQAVQKT++GHPFK LE TLS + ++ ++ + L L LFL
Sbjct: 638 FRIYKSVLQAVQKTDEGHPFKAYLEL-EITLSQEQIQ-KYTDCLQFYVNSTLKELRRLFL 695
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W LTYVGA FN
Sbjct: 696 VQDLVDSLKFAVLMWLLTYVGALFN 720
>UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus
familiaris|Rep: reticulon 1 - Canis familiaris
Length = 689
Score = 79.4 bits (187), Expect = 1e-13
Identities = 44/85 (51%), Positives = 55/85 (64%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+VLQAVQKT++GHPFK LE TLS + ++ ++ L L LFL
Sbjct: 551 FRIYKSVLQAVQKTDEGHPFKTYLEL-EITLSQEQIQ-KYTDCLQFYVNNTLKELRRLFL 608
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W LTYVGA FN
Sbjct: 609 VQDLVDSLKFAVLMWLLTYVGALFN 633
>UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep:
Reticulon 1-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 767
Score = 78.2 bits (184), Expect = 3e-13
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+VLQAVQKT++GHPFK L+ +LS + ++ ++ + L L LFL
Sbjct: 629 FRVYKSVLQAVQKTDEGHPFKVYLDVEM-SLSHDQMQ-KYAENVQYYINSTLKELRRLFL 686
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W LTYVGA FN
Sbjct: 687 VQDLVDSLKFAVLMWLLTYVGALFN 711
>UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep:
Reticulon 1-A1 - Fugu rubripes (Japanese pufferfish)
(Takifugu rubripes)
Length = 729
Score = 77.0 bits (181), Expect = 6e-13
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+VLQAVQKT++GHPFK LE TLS ++ + + L LFL
Sbjct: 591 FRIYKSVLQAVQKTDEGHPFKSYLEM-EITLSQDQIS-KYADKILLYSNTCVKELRRLFL 648
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W LTYVGA FN
Sbjct: 649 VQDLVDSLKFAVLMWLLTYVGALFN 673
>UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep:
Reticulon 5-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 818
Score = 76.2 bits (179), Expect = 1e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+VLQAVQKT++GHPFK LE +LS ++ ++ + L LFL
Sbjct: 681 FRVYKSVLQAVQKTDEGHPFKSYLEV-EISLSADQIS-KYVDKTQLYINTTMKELRRLFL 738
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DS+ F VL+W LTYVGA FN
Sbjct: 739 VQDLVDSIKFAVLMWLLTYVGALFN 763
>UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L -
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Length = 383
Score = 74.9 bits (176), Expect = 3e-12
Identities = 47/147 (31%), Positives = 61/147 (41%)
Frame = +3
Query: 174 PHAWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
P P P+V L+YWR+
Sbjct: 182 PSTPLQPLMQFPKVVELLYWRDVKTSGVVFGASLSLLLSLTLCSIVSVSSYIGLALLSVT 241
Query: 354 XXFRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXL 533
FR+YK +LQA+QK+++GHPFK L+ LS ++ + L L
Sbjct: 242 ICFRIYKGILQAIQKSDEGHPFKLYLDQDV-ALSEGTVH-KYSDCVLARFNTTVTELRRL 299
Query: 534 FLXEDLXDSLXFGVLLWCLTYVGACFN 614
FL EDL DSL F VL+W LTYVGA FN
Sbjct: 300 FLVEDLVDSLKFAVLMWILTYVGALFN 326
>UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo
sapiens (Human)
Length = 373
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK V+QA+QK+++GHPF+ LE +S + ++ H+ + L LFL
Sbjct: 235 FRIYKGVIQAIQKSDEGHPFRAYLES-EVAISEELVQ-KYSNSALGHVNCTIKELRRLFL 292
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W TYVGA FN
Sbjct: 293 VDDLVDSLKFAVLMWVFTYVGALFN 317
>UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep:
Reticulon-4 - Homo sapiens (Human)
Length = 1192
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK V+QA+QK+++GHPF+ LE +S + ++ H+ + L LFL
Sbjct: 1054 FRIYKGVIQAIQKSDEGHPFRAYLES-EVAISEELVQ-KYSNSALGHVNCTIKELRRLFL 1111
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+DL DSL F VL+W TYVGA FN
Sbjct: 1112 VDDLVDSLKFAVLMWVFTYVGALFN 1136
>UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep:
Reticulon-3 - Homo sapiens (Human)
Length = 1032
Score = 73.7 bits (173), Expect = 6e-12
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+V+QAVQK+ +GHPFK L+ TLS A + H+ L + LFL
Sbjct: 893 FRIYKSVIQAVQKSEEGHPFKAYLDVDI-TLSSE-AFHNYMNAAMVHINRALKLIIRLFL 950
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL V +W +TYVGA FN
Sbjct: 951 VEDLVDSLKLAVFMWLMTYVGAVFN 975
>UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulon-3 -
Mus musculus (Mouse)
Length = 964
Score = 72.9 bits (171), Expect = 1e-11
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+V+QAVQK+ +GHPFK L+ TLS A + H+ L + LFL
Sbjct: 825 FRVYKSVIQAVQKSEEGHPFKAYLDVDI-TLSSE-AFHNYMNAAMVHVNKALKLIIRLFL 882
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL V +W +TYVGA FN
Sbjct: 883 VEDLVDSLKLAVFMWLMTYVGAVFN 907
>UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2 -
Xenopus laevis (African clawed frog)
Length = 1055
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 363 RLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLX 542
R+YK +LQA+QK+ +GHPF+ +LE ++ H+ + L LFL
Sbjct: 918 RIYKGILQAIQKSEEGHPFRSILESN--LAVPEDLVQKYCNVALNHVNCTVKELRHLFLV 975
Query: 543 EDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL F VL+W TY+GA FN
Sbjct: 976 EDLVDSLKFAVLMWVFTYIGALFN 999
>UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 991
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK +LQA+QK+++GHPF+ LE LS ++ L + + LFL
Sbjct: 853 FRIYKGILQAIQKSDEGHPFRQYLEE-EVALSEEVVH-KYSDLVLAKLNRSVAEVRRLFL 910
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL F L+W LTYVGA FN
Sbjct: 911 VEDLVDSLKFAALMWILTYVGALFN 935
>UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep:
Reticulon 6-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 875
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +3
Query: 363 RLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLX 542
R++ VLQA++KT DGHPF+ LE R L A + L L LFL
Sbjct: 738 RVFTAVLQAMRKTEDGHPFRQYLE--RDVLLSADAVHTHSEALLRRINTALVELRRLFLV 795
Query: 543 EDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL V LW LTYVG+ FN
Sbjct: 796 EDLVDSLKLAVGLWLLTYVGSWFN 819
>UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon 4
isoform B2; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to reticulon 4 isoform B2 -
Strongylocentrotus purpuratus
Length = 943
Score = 63.3 bits (147), Expect = 8e-09
Identities = 39/85 (45%), Positives = 47/85 (55%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK VL AVQK+++G PFK LE TLS + + + L L L
Sbjct: 805 FRVYKTVLAAVQKSDEGSPFKPYLEIDV-TLSEDQIES-YSKKAVQKINVCITSLRHLLL 862
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DS+ F V LW LTYVGA FN
Sbjct: 863 VEDLVDSIKFAVGLWLLTYVGAWFN 887
>UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10698,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 214
Score = 62.9 bits (146), Expect = 1e-08
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+V+QAVQK++DGHPF+ LL+ ++S R ++ + L L
Sbjct: 74 FRVYKSVIQAVQKSDDGHPFRSLLDRDI-SVSSEWIR-ALADQSLVYVNWFVSQTRRLIL 131
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL ++W +TYVGA FN
Sbjct: 132 VEDLVDSLKVATVMWVMTYVGAIFN 156
>UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep:
RTN-B2 - Ciona intestinalis (Transparent sea squirt)
Length = 377
Score = 56.4 bits (130), Expect = 1e-06
Identities = 33/85 (38%), Positives = 44/85 (51%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FRLYK VLQ + T +PF+ LL+ TLS ++ HL L L L
Sbjct: 239 FRLYKLVLQTLNGTQQPNPFQSLLDM-EVTLSKDQIH-KYADVILDHLNCTLVCTRDLVL 296
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
+++ SL F V +W LTY+G CFN
Sbjct: 297 VKNMVASLKFAVFMWLLTYIGCCFN 321
>UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 53.6 bits (123), Expect = 7e-06
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
+R+ V+ A+QK+ +PFK LL+ + H+ L LFL
Sbjct: 52 YRVGMTVMGAIQKSGTENPFKTLLD--KEIEIPKEKAVEMAESLAEHINCLTKSLRRLFL 109
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
ED+ DS+ FGV+LW L+YVGA F+
Sbjct: 110 VEDIVDSIKFGVMLWVLSYVGAWFS 134
>UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep:
Reticulon-2 - Mus musculus (Mouse)
Length = 471
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +3
Query: 363 RLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLX 542
R+Y+ VLQAV + + +PF+ L+ TL+ R H+ + L FL
Sbjct: 322 RVYRKVLQAVHRGDGTNPFQAYLDMDL-TLTREQTE-RLSQQIASHVVSTATQLRHFFLV 379
Query: 543 EDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL +L + LT+VGA FN
Sbjct: 380 EDLVDSLKLALLFYILTFVGAIFN 403
>UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep:
Reticulon-2 - Homo sapiens (Human)
Length = 545
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +3
Query: 363 RLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLX 542
R+Y+ VLQAV + + +PF+ L+ TL+ R T + + L FL
Sbjct: 395 RVYRKVLQAVHRGDGANPFQAYLDVDL-TLTREQTE-RLSHQITSRVVSAATQLRHFFLV 452
Query: 543 EDLXDSLXFGVLLWCLTYVGACFN 614
EDL DSL +L + LT+VGA FN
Sbjct: 453 EDLVDSLKLALLFYILTFVGAIFN 476
>UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xenopus
laevis (African clawed frog)
Length = 321
Score = 47.6 bits (108), Expect = 5e-04
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 363 RLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAX-LYXLXXLFL 539
RLY +L A+++ N +PF++ L+ L + L + L L LFL
Sbjct: 184 RLYTKLLHALKRGNGANPFQYYLDTD---LKLTTKQAEEIVARAFSLASTTLCTLRSLFL 240
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
E+L DSL F V+++ LTYVGA FN
Sbjct: 241 VEELKDSLKFLVIVYLLTYVGAVFN 265
>UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep:
Reticulon - Caenorhabditis remanei
Length = 222
Score = 40.3 bits (90), Expect = 0.068
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR YK + ++KT+ +PF +L L + T H L L
Sbjct: 76 FRAYKKIEAQIKKTDTENPFNEILAKDL-ALPQEKVHAQ-ADVITEHATCVANKLKKLIF 133
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
E +S+ FG++LW LTYV + F+
Sbjct: 134 VESPLESIKFGLILWSLTYVASWFS 158
>UniRef50_UPI0000E822BE Cluster: PREDICTED: similar to RTN3w; n=1;
Gallus gallus|Rep: PREDICTED: similar to RTN3w - Gallus
gallus
Length = 115
Score = 38.7 bits (86), Expect = 0.21
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +3
Query: 360 FRLYKNVLQAVQKTNDGHPFK 422
FR+YK+V+QAVQK+ +GHPF+
Sbjct: 95 FRVYKSVIQAVQKSEEGHPFR 115
>UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to RTN2 protein, partial - Ornithorhynchus
anatinus
Length = 188
Score = 37.5 bits (83), Expect = 0.48
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 522 LXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
L LFL ED+ DSL +L + LT+VGA FN
Sbjct: 107 LRHLFLVEDIVDSLKLALLFYILTFVGAVFN 137
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,891,195
Number of Sequences: 1657284
Number of extensions: 6061202
Number of successful extensions: 23702
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23649
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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