BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L17
(928 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p pro... 119 5e-27
AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE... 119 5e-27
AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB... 119 5e-27
BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p pro... 103 3e-22
AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA... 83 5e-16
AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF... 82 1e-15
AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC... 81 3e-15
AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG... 81 3e-15
AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD... 81 3e-15
U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-li... 30 3.9
AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA ... 30 3.9
>AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p
protein.
Length = 234
Score = 119 bits (287), Expect = 5e-27
Identities = 65/155 (41%), Positives = 80/155 (51%)
Frame = +3
Query: 150 PSLCTILDPHAWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
P +C+ILDP+AWF P+RLHP+VESLIYWR+
Sbjct: 17 PLICSILDPNAWFKPERLHPQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYL 76
Query: 330 XXXXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXA 509
FR+YK+V QAVQKTN+GHPFK LE TLS + H+
Sbjct: 77 SLLTLFGTVAFRIYKSVTQAVQKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHING 134
Query: 510 XLYXLXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
+ L LFL ED+ DS+ FGV+LW TYVGA FN
Sbjct: 135 FISELRRLFLVEDIIDSIKFGVILWVFTYVGAWFN 169
>AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE,
isoform E protein.
Length = 234
Score = 119 bits (287), Expect = 5e-27
Identities = 65/155 (41%), Positives = 80/155 (51%)
Frame = +3
Query: 150 PSLCTILDPHAWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
P +C+ILDP+AWF P+RLHP+VESLIYWR+
Sbjct: 17 PLICSILDPNAWFKPERLHPQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYL 76
Query: 330 XXXXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXA 509
FR+YK+V QAVQKTN+GHPFK LE TLS + H+
Sbjct: 77 SLLTLFGTVAFRIYKSVTQAVQKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHING 134
Query: 510 XLYXLXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
+ L LFL ED+ DS+ FGV+LW TYVGA FN
Sbjct: 135 FISELRRLFLVEDIIDSIKFGVILWVFTYVGAWFN 169
>AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB,
isoform B protein.
Length = 234
Score = 119 bits (287), Expect = 5e-27
Identities = 65/155 (41%), Positives = 80/155 (51%)
Frame = +3
Query: 150 PSLCTILDPHAWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
P +C+ILDP+AWF P+RLHP+VESLIYWR+
Sbjct: 17 PLICSILDPNAWFKPERLHPQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYL 76
Query: 330 XXXXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXA 509
FR+YK+V QAVQKTN+GHPFK LE TLS + H+
Sbjct: 77 SLLTLFGTVAFRIYKSVTQAVQKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHING 134
Query: 510 XLYXLXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
+ L LFL ED+ DS+ FGV+LW TYVGA FN
Sbjct: 135 FISELRRLFLVEDIIDSIKFGVILWVFTYVGAWFN 169
>BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p
protein.
Length = 458
Score = 103 bits (248), Expect = 3e-22
Identities = 59/145 (40%), Positives = 71/145 (48%)
Frame = +3
Query: 180 AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
AWF P+RLHP+VESLIYWR+
Sbjct: 251 AWFKPERLHPQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVA 310
Query: 360 FRLYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFL 539
FR+YK+V QAVQKTN+GHPFK LE TLS + H+ + L LFL
Sbjct: 311 FRIYKSVTQAVQKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFL 368
Query: 540 XEDLXDSLXFGVLLWCLTYVGACFN 614
ED+ DS+ FGV+LW TYVGA FN
Sbjct: 369 VEDIIDSIKFGVILWVFTYVGAWFN 393
>AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA,
isoform A protein.
Length = 222
Score = 83.0 bits (196), Expect = 5e-16
Identities = 53/143 (37%), Positives = 63/143 (44%)
Frame = +3
Query: 186 FDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFR 365
F P VESLIYWR+ FR
Sbjct: 17 FQPLPERGPVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFR 76
Query: 366 LYKNVLQAVQKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXE 545
+YK+V QAVQKTN+GHPFK LE TLS + H+ + L LFL E
Sbjct: 77 IYKSVTQAVQKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVE 134
Query: 546 DLXDSLXFGVLLWCLTYVGACFN 614
D+ DS+ FGV+LW TYVGA FN
Sbjct: 135 DIIDSIKFGVILWVFTYVGAWFN 157
>AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF,
isoform F protein.
Length = 595
Score = 81.8 bits (193), Expect = 1e-15
Identities = 51/134 (38%), Positives = 61/134 (45%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
VESLIYWR+ FR+YK+V QAV
Sbjct: 399 VESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 458
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKTN+GHPFK LE TLS + H+ + L LFL ED+ DS+ FG
Sbjct: 459 QKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 516
Query: 573 VLLWCLTYVGACFN 614
V+LW TYVGA FN
Sbjct: 517 VILWVFTYVGAWFN 530
>AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC,
isoform C protein.
Length = 202
Score = 80.6 bits (190), Expect = 3e-15
Identities = 50/134 (37%), Positives = 61/134 (45%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
+ESLIYWR+ FR+YK+V QAV
Sbjct: 6 LESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 65
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKTN+GHPFK LE TLS + H+ + L LFL ED+ DS+ FG
Sbjct: 66 QKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 123
Query: 573 VLLWCLTYVGACFN 614
V+LW TYVGA FN
Sbjct: 124 VILWVFTYVGAWFN 137
>AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG,
isoform G protein.
Length = 224
Score = 80.6 bits (190), Expect = 3e-15
Identities = 50/134 (37%), Positives = 61/134 (45%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
+ESLIYWR+ FR+YK+V QAV
Sbjct: 28 LESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 87
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKTN+GHPFK LE TLS + H+ + L LFL ED+ DS+ FG
Sbjct: 88 QKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 145
Query: 573 VLLWCLTYVGACFN 614
V+LW TYVGA FN
Sbjct: 146 VILWVFTYVGAWFN 159
>AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD,
isoform D protein.
Length = 224
Score = 80.6 bits (190), Expect = 3e-15
Identities = 50/134 (37%), Positives = 61/134 (45%)
Frame = +3
Query: 213 VESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRLYKNVLQAV 392
+ESLIYWR+ FR+YK+V QAV
Sbjct: 28 LESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAV 87
Query: 393 QKTNDGHPFKWLLEGGR*TLSXXXARXRWXXXXTXHLXAXLYXLXXLFLXEDLXDSLXFG 572
QKTN+GHPFK LE TLS + H+ + L LFL ED+ DS+ FG
Sbjct: 88 QKTNEGHPFKDYLELDL-TLSHEKVQ-NIAGVAVAHINGFISELRRLFLVEDIIDSIKFG 145
Query: 573 VLLWCLTYVGACFN 614
V+LW TYVGA FN
Sbjct: 146 VILWVFTYVGAWFN 159
>U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-like
protein protein.
Length = 158
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 498 HLXAXLYXLXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
H+ L + L L E DSL F VLL + +G CFN
Sbjct: 101 HINLILNRMIELLLVEKWEDSLKFLVLLCGINLLGDCFN 139
>AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA
protein.
Length = 154
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 498 HLXAXLYXLXXLFLXEDLXDSLXFGVLLWCLTYVGACFN 614
H+ L + L L E DSL F VLL + +G CFN
Sbjct: 97 HINLILNRMIELLLVEKWEDSLKFLVLLCGINLLGDCFN 135
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,188,539
Number of Sequences: 53049
Number of extensions: 306041
Number of successful extensions: 1546
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -