Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L14
         (975 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    28   0.15 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.19 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.34 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.59 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.78 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   7.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   7.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   7.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 5/56 (8%)
 Frame = +2

Query: 821 PPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-----PXPXPPXP 973
           PP P     P   P    P   P P PP P         P        P P PP P
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 56  PHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHP 114


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.19
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +1

Query: 820 PXPPP-PSPXXPXXXXPXXPXXPPPPPPPP 906
           P P P  SP  P    P  P   PPP  PP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 25.4 bits (53), Expect = 0.78
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = +2

Query: 821 PPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPPPXPXP 964
           P P   P   P  P    P  P   PPP          PP  PP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPP--------GGPPGAPPSQNP 60



 Score = 23.0 bits (47), Expect = 4.2
 Identities = 13/40 (32%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
 Frame = +2

Query: 797 PSXXXXXPPPPPXXPXXPPXXPXXXXPXXPPPP--PPPXP 910
           PS     P P P      P       P   PPP  PP  P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/40 (27%), Positives = 11/40 (27%)
 Frame = +3

Query: 819 PXPPPXXPXXPXXXXXXXXPXPPPPPPPPXXXXXPXXXXP 938
           P P P     P        P P   PPP      P    P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 26.6 bits (56), Expect = 0.34
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 882  PPPPPPPP 905
            PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 26.6 bits (56), Expect = 0.34
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 883  PPPPPPPP 906
            PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 876  PXPPPPPP 899
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 887  PPPPPPXP 910
            PPPPPP P
Sbjct: 1355 PPPPPPPP 1362


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.8 bits (54), Expect = 0.59
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 876 PXPPPPPPPP 905
           P P PPPPPP
Sbjct: 339 PKPAPPPPPP 348



 Score = 25.4 bits (53), Expect = 0.78
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 874 PXXPPPPPPPP 906
           P  P PPPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 865 PXXPXXPPPPP 897
           P  P  PPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 935 PPXPPPXPXPP 967
           PP P P P PP
Sbjct: 338 PPKPAPPPPPP 348


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.78
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -3

Query: 973 GXGGXXXGGGXXGXXXXGXXXXXGGGGGGGGXG 875
           G G    GG   G            GGGGGG G
Sbjct: 21  GPGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53



 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -1

Query: 972 GXGGXGXGGGXGGXXXXXXXXGXGGGGGGGXXG 874
           G G    GG   G        G   GGGGG  G
Sbjct: 21  GPGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 876  PXPPPPPP 899
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 882  PPPPPPPP 905
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 883  PPPPPPPP 906
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 167 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 225



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 223 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPPHP 281


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 56  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 114


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 27  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 83  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
 Frame = +2

Query: 818 PPPPPXXPXXPPXXPXXXXPXXPPPPPPPXPXXXXXXXXPPXPP-------PXPXPPXP 973
           P P       P   P    P   P P PP P           P        P P PP P
Sbjct: 139 PHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,588
Number of Sequences: 438
Number of extensions: 16384
Number of successful extensions: 91
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32169774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)