Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L11
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051694-1|AAH51694.1| 677|Homo sapiens similar to KIAA1680 pro... 33 1.9
AB051467-1|BAB21771.1| 902|Homo sapiens KIAA1680 protein protein. 33 1.9
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 7.5
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 7.5
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 7.5
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 7.5
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 7.5
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 7.5
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 7.5
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 7.5
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 7.5
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 7.5
AL358781-4|CAI40217.1| 587|Homo sapiens KIAA0515 protein. 30 10.0
>BC051694-1|AAH51694.1| 677|Homo sapiens similar to KIAA1680
protein protein.
Length = 677
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 612 TNHGGSLLGVRRLVFCDRTPSRPYHRQKSGXSYPDPTHRSLMLSS 478
TN G RR +F RTPS +H +K +PT+++L +S+
Sbjct: 49 TNSSSGSTGKRRSIF--RTPSISFHHKKGSEPKQEPTNQNLSISN 91
>AB051467-1|BAB21771.1| 902|Homo sapiens KIAA1680 protein protein.
Length = 902
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 612 TNHGGSLLGVRRLVFCDRTPSRPYHRQKSGXSYPDPTHRSLMLSS 478
TN G RR +F RTPS +H +K +PT+++L +S+
Sbjct: 51 TNSSSGSTGKRRSIF--RTPSISFHHKKGSEPKQEPTNQNLSISN 93
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 242 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 214 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 303
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AL358781-4|CAI40217.1| 587|Homo sapiens KIAA0515 protein.
Length = 587
Score = 30.3 bits (65), Expect = 10.0
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +3
Query: 171 AEDYSIRGQPSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG 350
+ D+S R + RR D Q+ GG +LG+ + R + + KL
Sbjct: 113 SSDFSERRE--RREGPGSEPDSQVDGGLSGASLGEKKELAKRSFSSQRPVVDRQSRKLEP 170
Query: 351 QAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRQIGGRSGMTA-SGSGVWDLDKX 521
+G + + PGG T+ Y + + + + D GG SG ++ SG + L++
Sbjct: 171 GGFGEKPVRPGGGDTSPRYESQQNGTPLKVKRSPD-EALPGGLSGCSSGSGHSPYALERA 229
Query: 522 THFSA 536
H SA
Sbjct: 230 AHASA 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,010,961
Number of Sequences: 237096
Number of extensions: 2556285
Number of successful extensions: 5758
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5684
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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