Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L10
         (1257 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   6.7  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   6.7  

>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
            protein family member 4 protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 6.7
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 887  PIXAXTXPPHPXQRXXRXLXXSPPPAAXAPXXQPPRGXXPXQTSRPXRXPXP 1042
            P  + + PPHP       L   PPPAA  P   PP    P + + P   P P
Sbjct: 477  PPSSPSFPPHPDFAAPPPLP--PPPAADYPTLPPPPLSQPTRGAPPPPPPPP 526


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 6.7
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 887  PIXAXTXPPHPXQRXXRXLXXSPPPAAXAPXXQPPRGXXPXQTSRPXRXPXP 1042
            P  + + PPHP       L   PPPAA  P   PP    P + + P   P P
Sbjct: 348  PPSSPSFPPHPDFAAPPPLP--PPPAADYPTLPPPPLSQPTRGAPPPPPPPP 397


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,411,822
Number of Sequences: 237096
Number of extensions: 1175755
Number of successful extensions: 3959
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3687
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17945070980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)