Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L08
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    28   0.11 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    28   0.11 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   5.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 118  SAGRTAKNVNATKYTRXSQYKKSKXKARCPGXEXVMIVNSRVTVVSPNPSSKRRQKPLR 294
            S  + AK   + +     + ++S   +R P        N R TVVSP P+ +R  K ++
Sbjct: 858  SIQQKAKRSKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVVK 916


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 118  SAGRTAKNVNATKYTRXSQYKKSKXKARCPGXEXVMIVNSRVTVVSPNPSSKRRQKPLR 294
            S  + AK   + +     + ++S   +R P        N R TVVSP P+ +R  K ++
Sbjct: 896  SIQQKAKRSKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVVK 954


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +1

Query: 97  KWXTYQNSAGRTAKNVNATKYTRXSQYKKSKXKARCP 207
           +W TYQ +      N    KY     Y KS+   R P
Sbjct: 394 RWFTYQETVDPAGCNAGPAKY-----YLKSRDPERTP 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,279
Number of Sequences: 438
Number of extensions: 1667
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)