Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L06
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780...    29   6.8  

>11_06_0632 +
           25674807-25675477,25676472-25677861,25677948-25678083,
           25678185-25678282,25678470-25678535,25678699-25678827,
           25679570-25679746,25680576-25680614
          Length = 901

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 251 NXLEEFPPGLRSSADRAESQHQREDEAQXTYEXHFTEXRECRRMQXXKTRAXXREREEXA 72
           N   E     R+S+DR E + Q   E +   +    + RE RR++  +     +ERE  A
Sbjct: 482 NFFGEAEQSERTSSDREEKERQARLEQEQEMKLMEEKKREQRRLEKERELEQQKERERQA 541


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,029,512
Number of Sequences: 37544
Number of extensions: 215129
Number of successful extensions: 307
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)