Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L04
(861 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 124 2e-27
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 101 3e-20
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 94 4e-18
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 80 6e-14
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 80 8e-14
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 74 4e-12
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 66 8e-10
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 66 8e-10
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 66 1e-09
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 58 4e-07
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 57 7e-07
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 56 1e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 54 4e-06
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 54 4e-06
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 52 1e-05
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 3e-04
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 46 0.001
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 46 0.002
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 46 0.002
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 45 0.002
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 42 0.020
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 41 0.046
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.046
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 36 1.7
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 2.3
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 7.0
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 9.3
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 9.3
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 33 9.3
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 124 bits (300), Expect = 2e-27
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +2
Query: 131 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 311 TNIGSGV 331
TNIGSGV
Sbjct: 61 TNIGSGV 67
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 101 bits (241), Expect = 3e-20
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = +2
Query: 119 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 298
S++K+ + A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV
Sbjct: 9 SQVKITAIA--SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINV 64
Query: 299 RDLITNIGSGV 331
+DLITNIGSGV
Sbjct: 65 KDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 94.3 bits (224), Expect = 4e-18
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +2
Query: 131 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 311 TNIGSG 328
N+G+G
Sbjct: 61 CNVGAG 66
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +2
Query: 158 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 325
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/65 (60%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = +2
Query: 134 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLI 310
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 311 TNIGS 325
++GS
Sbjct: 61 MSMGS 65
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.8 bits (188), Expect = 8e-14
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2
Query: 134 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 313
+S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 314 NIGSG 328
N+G+G
Sbjct: 61 NVGAG 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +2
Query: 134 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLI 310
+S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 311 TNIGSG 328
N+GSG
Sbjct: 61 LNVGSG 66
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 66.5 bits (155), Expect = 8e-10
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +2
Query: 110 LARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 289
++ ++L EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL
Sbjct: 4 VSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALST 63
Query: 290 INVRDLITNIGS 325
NV D++ G+
Sbjct: 64 TNVSDIVAGCGA 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 66.5 bits (155), Expect = 8e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 233 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 331
A VD+EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +2
Query: 119 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 298
S+L + EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 299 RDLITNIGSG 328
L++ +GSG
Sbjct: 67 GSLLSAVGSG 76
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 131 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDL 307
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 308 ITNIGS 325
+T + S
Sbjct: 61 LTEVAS 66
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +2
Query: 146 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 292
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 57.6 bits (133), Expect = 4e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 143 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 319
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 320 GS 325
GS
Sbjct: 77 GS 78
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 56.8 bits (131), Expect = 7e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +2
Query: 119 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 298
++L K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
Query: 299 RDLITNIGSG 328
L++N+ G
Sbjct: 67 EGLLSNLSVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +2
Query: 146 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 325
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 143 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 322
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 323 SG 328
G
Sbjct: 63 LG 64
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +2
Query: 146 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 325
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +2
Query: 146 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 325
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +2
Query: 140 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 289
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 131 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
M SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 311 TNIGSG 328
+ + G
Sbjct: 60 SKVSFG 65
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 45.6 bits (103), Expect = 0.002
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +2
Query: 134 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
+S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 45.6 bits (103), Expect = 0.002
Identities = 18/51 (35%), Positives = 35/51 (68%)
Frame = +2
Query: 161 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 313
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 149 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 41.9 bits (94), Expect = 0.020
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +2
Query: 134 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 313
++ A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 314 NIGSG 328
+I G
Sbjct: 60 SISFG 64
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 40.7 bits (91), Expect = 0.046
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 152 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 325
AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + + I N GS
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGS 66
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 146 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 259
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 158 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 158 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 149 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 304
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 131 MVSKAELACVYSALILVDDD 190
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 173 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 319
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 158 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 310
VY+AL+L + E + +L+AA V+ E ALEG+N+ ++I
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,621,376
Number of Sequences: 1657284
Number of extensions: 7765037
Number of successful extensions: 17053
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 16719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17040
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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