Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L03
         (1071 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
 Frame = +1

Query: 487 RNPVGVCXIQTPCPRX----LDXCPSTXLGPWYRDXLSTXLAXXXPGGNFSPXVTWF 645
           RN  G C   T CP       + C      P +R  +ST  A   PG  FS    WF
Sbjct: 207 RNRQGQCVNPTECPATGKTDTNPCALVLCKPGHRCTMSTGQATCVPGIIFSVRGRWF 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,732,407
Number of Sequences: 27780
Number of extensions: 197916
Number of successful extensions: 316
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2866653212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)