Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_L02
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 169 3e-42
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 144 5e-35
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.5
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 7.3
U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily ass... 28 7.3
Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical p... 28 9.6
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 28 9.6
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 28 9.6
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 28 9.6
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 28 9.6
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 169 bits (410), Expect = 3e-42
Identities = 82/180 (45%), Positives = 109/180 (60%)
Frame = +1
Query: 199 VNLGVGAXSAXNGKPWVLPIVRKLEKQLAAXETLLHEYLPVLGLEQFCNASVAMLLGEDS 378
VNL +GA G+PWVLP+V + E ++A +L HEYLPVLG E F A+ ++LG +S
Sbjct: 31 VNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAES 90
Query: 379 PAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFVNSGFTKPRL 558
PAI ++FGVQ LSGTG LR GAEFL T Y S PTW NH LVF +GFT
Sbjct: 91 PAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVAD 150
Query: 559 VPXLGREDQGHXLRXFHRRXQERSENAVILLHACAHNPTGIXPTXEQWVXIXDVMEERXL 738
+++ + F + E +VI+LH CAHNPTG+ PT EQW + +V++ + L
Sbjct: 151 YTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNL 210
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +2
Query: 746 FFDXAYQGFASGDLXXXPWAXXXF 817
FFD AYQGFASGD WA F
Sbjct: 213 FFDIAYQGFASGDPAADAWAIRYF 236
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 144 bits (350), Expect = 5e-35
Identities = 73/184 (39%), Positives = 105/184 (57%)
Frame = +1
Query: 193 NXVNLGVGAXSAXNGKPWVLPIVRKLEKQLAAXETLLHEYLPVLGLEQFCNASVAMLLGE 372
N +NLGVGA GKP+VL VR+ E+Q+ + + EY + G+ +F + + G+
Sbjct: 48 NKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK-MDKEYSTITGVPEFAPLAAKLAFGD 106
Query: 373 DSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFVNSGFTKP 552
+S I G+ F Q +SGTG LR+G +F+ K + T +Y TPTW NH VF NSG +
Sbjct: 107 NSEVIRDGRVFTTQSISGTGALRIGGQFVEKFIPSKTLFYPTPTWANHLPVFRNSGLS-I 165
Query: 553 RLVPXLGREDQGHXLRXFHRRXQERSENAVILLHACAHNPTGIXPTXEQWVXIXDVMEER 732
+ +E G + + E +VILLHACAHNPTG+ PT EQW + V++ER
Sbjct: 166 QPYRYYNQETLGFDVEGALEDISKMPEGSVILLHACAHNPTGVDPTKEQWKKLSQVLKER 225
Query: 733 XLXP 744
+ P
Sbjct: 226 KILP 229
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = +2
Query: 560 YRYWDAKTRGIXFXGFIEXLKSARR---MPSYCCTHXXXXXXXXXXXXNSG*XXLMSWRS 730
YRY++ +T G G +E + + + C H L +
Sbjct: 168 YRYYNQETLGFDVEGALEDISKMPEGSVILLHACAHNPTGVDPTKEQWKKLSQVL---KE 224
Query: 731 ASCXRFFDXAYQGFASGDLXXXPWAXXXF 817
FFD AYQGFASGD+ +A F
Sbjct: 225 RKILPFFDMAYQGFASGDVDDDAFALRHF 253
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 136 bits (330), Expect = 1e-32
Identities = 72/180 (40%), Positives = 102/180 (56%)
Frame = +1
Query: 199 VNLGVGAXSAXNGKPWVLPIVRKLEKQLAAXETLLHEYLPVLGLEQFCNASVAMLLGEDS 378
+NLGVGA GKP+VLP V++ E+Q+ A L EY ++GL +F S + LGE+S
Sbjct: 45 INLGVGAYRDDQGKPFVLPSVKEAERQVIAAN-LDKEYAGIVGLPEFTKLSAQLALGENS 103
Query: 379 PAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFVNSGFTKPRL 558
I + F Q +SGTG LR+G+EFL+K+ K Y TPTW NH +F +G +
Sbjct: 104 DVIKNKRIFTTQSISGTGALRIGSEFLSKYAKTKVIYQPTPTWGNHVPIFKFAG-VDVKQ 162
Query: 559 VPXLGREDQGHXLRXFHRRXQERSENAVILLHACAHNPTGIXPTXEQWVXIXDVMEERXL 738
+ G + E + ILLHACAHNPTG+ P+ +QW I D++++R L
Sbjct: 163 YRYYDKSTCGFDETGALADIAQIPEGSTILLHACAHNPTGVDPSRDQWKKISDIVKKRNL 222
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 136 bits (330), Expect = 1e-32
Identities = 72/180 (40%), Positives = 102/180 (56%)
Frame = +1
Query: 199 VNLGVGAXSAXNGKPWVLPIVRKLEKQLAAXETLLHEYLPVLGLEQFCNASVAMLLGEDS 378
+NLGVGA GKP+VLP V++ E+Q+ A L EY ++GL +F S + LGE+S
Sbjct: 45 INLGVGAYRDDQGKPFVLPSVKEAERQVIAAN-LDKEYAGIVGLPEFTKLSAQLALGENS 103
Query: 379 PAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFVNSGFTKPRL 558
I + F Q +SGTG LR+G+EFL+K+ K Y TPTW NH +F +G +
Sbjct: 104 DVIKNKRIFTTQSISGTGALRIGSEFLSKYAKTKVIYQPTPTWGNHVPIFKFAG-VDVKQ 162
Query: 559 VPXLGREDQGHXLRXFHRRXQERSENAVILLHACAHNPTGIXPTXEQWVXIXDVMEERXL 738
+ G + E + ILLHACAHNPTG+ P+ +QW I D++++R L
Sbjct: 163 YRYYDKSTCGFDETGALADIAQIPEGSTILLHACAHNPTGVDPSRDQWKKISDIVKKRNL 222
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 746 FFDXAYQGFASGDLXXXPWAXXXF 817
FFD AYQGFASGD+ +A F
Sbjct: 225 FFDMAYQGFASGDVDNDAFAVRYF 248
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 103 bits (247), Expect = 2e-22
Identities = 48/101 (47%), Positives = 66/101 (65%)
Frame = +1
Query: 199 VNLGVGAXSAXNGKPWVLPIVRKLEKQLAAXETLLHEYLPVLGLEQFCNASVAMLLGEDS 378
+NL + A +G+PWVLP+VR++E + HEYLP+LG + FC ++ A+LLG DS
Sbjct: 33 INLAIEAYRTEDGEPWVLPVVREIELKFPHEPHHNHEYLPILGHDGFCKSATALLLGNDS 92
Query: 379 PAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTP 501
AI G++F VQ +SGTG + VGAEFL + L T Y S P
Sbjct: 93 LAIKEGRSFSVQCISGTGAICVGAEFLAQVLSMKTIYVSNP 133
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 664 HNPTGIXPTXEQWVXIXDVMEERXL 738
+NPTG+ PT EQW+ + V++++ L
Sbjct: 138 YNPTGMDPTREQWIQMAQVIKQKNL 162
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 508 ENHHLVFVNSGFTKPRLVPXLGREDQGHXLRXFHRRXQERSENAVILLHACAHNPTGIXP 687
E+HHL+ +GFT E++ + + +VI+L ACA+NPTG+
Sbjct: 90 ESHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDL 149
Query: 688 TXEQWVXIXDVMEERXLXP 744
+ QW I V++ + L P
Sbjct: 150 SENQWKQIARVIKRKRLFP 168
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 746 FFDXAYQGFASGDLXXXPWAXXXF 817
FFD +YQG ASGD WA F
Sbjct: 169 FFDISYQGCASGDPAADSWAIRHF 192
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 434 PPVPDKTCTPKAFPAAMAGLSSPRSIATDA-LQNCSRPNTGRYSCSKVSXAASC 276
PP P +TC P PAA P A +A Q C GR C C
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDC 178
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 446 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 312
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 446 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 312
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 446 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 312
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily
assigned gene nameprotein 257 protein.
Length = 570
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 434 PPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGRYS 306
PP P T +P+A P A +S P TD+ QN S + G +S
Sbjct: 409 PPRPPTTASPRAAPVATFKVSWP----TDSSQNDSANDWGDFS 447
>Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical
protein Y57G11C.17 protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 260 FVSWKNSWQQXKPYCMNTFLC*VWSSFVMRLWLCSLVRIVL 382
F+ +WQ+ C N+ C +W F + W + ++L
Sbjct: 232 FIQQFETWQKTTEICWNSVKCALWFGFRLVFWF-GFIELIL 271
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 462 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 343
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 472 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 511
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 462 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 343
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 470 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 509
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 462 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 343
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 470 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 509
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 462 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 343
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 472 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,426,461
Number of Sequences: 27780
Number of extensions: 266515
Number of successful extensions: 705
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -