Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_L01
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.             32   3.0  
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  31   3.9  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   3.9  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    31   3.9  

>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
          Length = 6620

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +2

Query: 179  TSLILPKPPTLMETAPHLSTTVHLTWTVPKAD 274
            T L LP PP   E   H S TV L+W  P +D
Sbjct: 4518 TVLGLPDPPEDAEVVAHSSHTVTLSWAAPMSD 4549


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 170  TARTSLILPKPPTLMETAPHLSTTVHLTWTVPKAD 274
            TAR  +  P PP  ++       TVHL+W  PK D
Sbjct: 9507 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 9541


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 170   TARTSLILPKPPTLMETAPHLSTTVHLTWTVPKAD 274
             TAR  +  P PP  ++       TVHL+W  PK D
Sbjct: 16931 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 16965


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 170  TARTSLILPKPPTLMETAPHLSTTVHLTWTVPKAD 274
            TAR  +  P PP  ++       TVHL+W  PK D
Sbjct: 9507 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 9541


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,963,878
Number of Sequences: 237096
Number of extensions: 1373345
Number of successful extensions: 7444
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7429
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)