Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K24
         (1523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VR49 Cluster: CG3047-PA; n=3; Drosophila melanogaster...    36   3.7  

>UniRef50_Q9VR49 Cluster: CG3047-PA; n=3; Drosophila melanogaster|Rep:
            CG3047-PA - Drosophila melanogaster (Fruit fly)
          Length = 1286

 Score = 35.5 bits (78), Expect = 3.7
 Identities = 29/104 (27%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
 Frame = +2

Query: 911  PXQTTHXTXNRX----PRAXXXXXTKHPXNXTPNXXXXPHXTXXPXTXXRKXNTXPPXKH 1078
            P  TT  + +R     PR+     T  P   TP     P  T  P T   +  T      
Sbjct: 1008 PRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTP-STSRPTTTTPRSTTTTSTSR 1066

Query: 1079 TIXTXTXQXTRTHNANPQETQNTPEXTXHSTXVNXTNTXPRXXT 1210
               T     T+T    P  T  TP  T  +T    T T PR  T
Sbjct: 1067 PTTTTPRSTTKTSTCAP--TTTTPRSTTTTTTSRPTTTTPRSTT 1108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.309    0.121    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,237,102
Number of Sequences: 1657284
Number of extensions: 4702245
Number of successful extensions: 3451
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 162521628425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)