Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K24
         (1523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    36   0.19 
AE014298-140|AAN09035.1|  237|Drosophila melanogaster CG32814-PA...    31   5.5  

>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 29/104 (27%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
 Frame = +2

Query: 911  PXQTTHXTXNRX----PRAXXXXXTKHPXNXTPNXXXXPHXTXXPXTXXRKXNTXPPXKH 1078
            P  TT  + +R     PR+     T  P   TP     P  T  P T   +  T      
Sbjct: 1008 PRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTP-STSRPTTTTPRSTTTTSTSR 1066

Query: 1079 TIXTXTXQXTRTHNANPQETQNTPEXTXHSTXVNXTNTXPRXXT 1210
               T     T+T    P  T  TP  T  +T    T T PR  T
Sbjct: 1067 PTTTTPRSTTKTSTCAP--TTTTPRSTTTTTTSRPTTTTPRSTT 1108



 Score = 33.5 bits (73), Expect = 0.78
 Identities = 27/97 (27%), Positives = 33/97 (34%)
 Frame = +2

Query: 920  TTHXTXNRXPRAXXXXXTKHPXNXTPNXXXXPHXTXXPXTXXRKXNTXPPXKHTIXTXTX 1099
            TT       PR+     T  P   TP     P  +    T  R   T      T  T T 
Sbjct: 503  TTSGPTTTTPRSTTTTCTCSPTTTTPRSTTTPSTSRPTTTTPRSTTTTCTCSPT--TTTP 560

Query: 1100 QXTRTHNANPQETQNTPEXTXHSTXVNXTNTXPRXXT 1210
            + T T  +  + T  TP  T  +T    T T PR  T
Sbjct: 561  RSTTT-TSTSRPTTTTPRSTTTTTTSRPTTTTPRSTT 596



 Score = 32.7 bits (71), Expect = 1.4
 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 4/104 (3%)
 Frame = +2

Query: 911  PXQTTHXTXNRX----PRAXXXXXTKHPXNXTPNXXXXPHXTXXPXTXXRKXNTXPPXKH 1078
            P  TT  T +R     PR+     T+ P   TP        T  P T   +  T      
Sbjct: 240  PRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTT-STCAPTTTTPRSTTTTTTSR 298

Query: 1079 TIXTXTXQXTRTHNANPQETQNTPEXTXHSTXVNXTNTXPRXXT 1210
               T     T T   +P  T+ TP  T  ++    T T PR  T
Sbjct: 299  PTTTTPRCTTTTSTCSP--TRTTPRSTTTTSTSRPTTTTPRCTT 340



 Score = 30.7 bits (66), Expect = 5.5
 Identities = 24/88 (27%), Positives = 31/88 (35%)
 Frame = +2

Query: 947  PRAXXXXXTKHPXNXTPNXXXXPHXTXXPXTXXRKXNTXPPXKHTIXTXTXQXTRTHNAN 1126
            PR+     T  P   TP     P  +    T  R   T    + T  T T + T T    
Sbjct: 352  PRSTTKTSTCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTSRPT--TTTPRSTTT-TTT 408

Query: 1127 PQETQNTPEXTXHSTXVNXTNTXPRXXT 1210
             + T  TP  T  ++    T T PR  T
Sbjct: 409  RRPTTTTPRSTTTTSTSRPTTTTPRSTT 436


>AE014298-140|AAN09035.1|  237|Drosophila melanogaster CG32814-PA
            protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 1079 TIXTXTXQXTRTHNANPQETQNTPEXTXHSTXVNXTNTXPRXXTRXHXEQTYKSSRQXLX 1258
            T  T T   T THN     T NT   T H+T    T+      T  H   T  ++   + 
Sbjct: 120  TTTTHTTTTTTTHNTTTTTTHNTTTTTTHNTTTTTTHN-----TTTHTTTTTTTTTAEIT 174

Query: 1259 XKXHD 1273
             K +D
Sbjct: 175  TKPYD 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.121    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,928,213
Number of Sequences: 53049
Number of extensions: 270195
Number of successful extensions: 315
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8514103464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)