Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K23
         (1275 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.         32   5.1  
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.         32   5.1  
AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens ...    31   6.8  
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  31   6.8  
DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.       31   9.0  

>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
          Length = 1575

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 516  PPXPHPXSTPXXPXPTRXPPXXXTAXEPTP 605
            PP P P + P  P P + PP    A  P P
Sbjct: 1108 PPPPRPVAPPTRPAPPQRPPPPSGARSPAP 1137


>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
          Length = 1311

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 516  PPXPHPXSTPXXPXPTRXPPXXXTAXEPTP 605
            PP P P + P  P P + PP    A  P P
Sbjct: 1108 PPPPRPVAPPTRPAPPQRPPPPSGARSPAP 1137


>AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46366 fis, clone TESTI4051388. ).
          Length = 286

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 28/110 (25%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
 Frame = +3

Query: 357 APXCIPLXDLXXRXAPXXXPXQTP-LXNPXRSDPSXXXXXXRXXXXXXAXXAXXPPXPHP 533
           +P   P  +   R  P   P +TP   +P R+ P              A     PP   P
Sbjct: 98  SPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPRRT----PSTASPTRTPPRASP 153

Query: 534 XSTPXXPXPTRXPPXXXTAXEPTPXXXSXXXXXXXXXXNAXXPPXNPXRT 683
             TP    PTR PP    + + TP   S              P  +P RT
Sbjct: 154 RRTPPRASPTRTPP--RASPKRTPPRASPRRTPPRASPTRAPPRASPKRT 201


>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 47/221 (21%), Positives = 57/221 (25%), Gaps = 14/221 (6%)
 Frame = +1

Query: 604  PXXPPXXAXXLNPPXTHXXPXXTPXAHXAXXPXSXPRXXXAXXXXXXSAQRADXPXXPPL 783
            P  PP  A  L+PP         P       P    R          S    + P  PP 
Sbjct: 562  PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPP 621

Query: 784  XEARVAA----XXXXXXPPNXXXSP---XEXLSPXPVL-RXXXXPXXXXRXXAALXQXXX 939
              +R++           P     SP      LSP PV+ R    P        AL     
Sbjct: 622  EASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPALSPLGE 681

Query: 940  XIXP------XXPXXPXTXPDXHXXXSPXPXXXXXXXHVXQXXLXPPNXXPPTCXXXXXX 1101
               P        P  P   P      SP P             + PP+   P        
Sbjct: 682  LEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPIL 741

Query: 1102 PQXLPRXXSPXSPXXXXPXAXPXXTXXXXVXXPTXSSXLSP 1224
             + LP   SP       P   P           +  S LSP
Sbjct: 742  MEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSP 782


>DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.
          Length = 500

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 516 PPXPHPXSTPXXPXPTRXPPXXXTAXEPTP 605
           PP P P + P  P P + PP      +P+P
Sbjct: 88  PPPPRPVAPPTRPAPPQRPPPPSGRSQPSP 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,261,382
Number of Sequences: 237096
Number of extensions: 747749
Number of successful extensions: 3561
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3274
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)