Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K22
(961 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 36 0.049
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 36 0.064
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.26
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 33 0.34
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.45
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 32 0.79
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.0
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 1.4
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 1.4
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 31 1.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 31 1.8
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 2.4
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 3.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 3.9
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 6.1
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 7.4
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 39.5 bits (88), Expect = 0.004
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +3
Query: 117 PPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXGPP 296
PPPP PPP P +G GP P G GWG P GPP
Sbjct: 514 PPPPGAGQGWGQPPPGAGQGGGPPP--PGAGQGG-GPPPPGAGQGWGQPPPGAGQGGGPP 570
Query: 297 PXXGG-GXP 320
P G G P
Sbjct: 571 PPGAGQGGP 579
Score = 35.9 bits (79), Expect = 0.049
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 183 PPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXGPPP---XXGGGXP 320
PPP P +G GP P G GWG P GPPP GGG P
Sbjct: 503 PPP--PGAGQGG-GPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPP 548
Score = 32.7 bits (71), Expect = 0.45
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = -2
Query: 666 GXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPP---XPXGPPFPXXXTXXGAP 505
G P P A +G P PPP G PPP GPP P G P
Sbjct: 545 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPP 601
Score = 32.3 bits (70), Expect = 0.60
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 6/71 (8%)
Frame = +3
Query: 117 PPPPXXXXXXXXXXXXKXXXXAPPPXX------PXKXKGXXGPXXPXWGGGWGPPXXKXX 278
PPPP PPP P G GP P G G GPP
Sbjct: 547 PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAG 606
Query: 279 XXXGPPPXXGG 311
G PP G
Sbjct: 607 QGWGLPPPGSG 617
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 368 GGXXNXGGPXFXAKKKWX-PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXP 213
G G P A + W PPP G G G P PP G PP P
Sbjct: 540 GAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPP 592
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Frame = -2
Query: 666 GXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXP-----XGPPFPXXXTXXGAP 505
G P P A +G P PPP G PP P GPP P G P
Sbjct: 501 GGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQP 559
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPP 555
PPPP G P G +G + P G PP G PPP
Sbjct: 536 PPPPGAGQGGGPPPPG--AGQGWGQPPPGAGQGGGPPPPGAGQGGPPP 581
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPPXP 549
PPPP G P G +G + P G PP G PP P
Sbjct: 503 PPPPGAGQGGGPPPPGAG--QGWGQPPPGAGQGGGPPPPGAGQGGGPPPP 550
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Frame = -2
Query: 666 GXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXP----XGPPFP 532
G P P A +G P PPP G PP P GPP P
Sbjct: 534 GGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPP 582
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 234 PXWGGGWGPPXXKXXXXXGPPP---XXGGGXP 320
P G GWG P GPPP GGG P
Sbjct: 484 PGGGQGWGQPPPGAGQGGGPPPPGAGQGGGPP 515
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 222 GPXXPXWGGGWGPPXXKXXXXXG-PPPXXG-GGXP 320
GP P G G GPP G PPP G GG P
Sbjct: 502 GPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGP 536
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = +3
Query: 114 PPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXGP 293
PPPP PPP G G P G GPP P
Sbjct: 536 PPPPGAGQGGGPPPPGAGQGWGQPPPGA-----GQGGGPPPPGAGQGGPPPPGAGQEGPP 590
Query: 294 PPXXG-GGXP 320
PP G GG P
Sbjct: 591 PPGAGQGGGP 600
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 35.9 bits (79), Expect = 0.049
Identities = 25/68 (36%), Positives = 25/68 (36%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
PPPPPPP APPP P G P P GGG PP
Sbjct: 660 PPPPPPPPPGGQAGG---------APPPPPPPLPGGAAPPPPPPIGGGAPPP-------- 702
Query: 288 GPPPXXGG 311
PPP GG
Sbjct: 703 -PPPGFGG 709
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXG 234
PPP GG GGAP PPP G
Sbjct: 680 PPPLPGGAAPPPPPPIGGGAPPPPPPG 706
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -3
Query: 314 PPPXX--GGGPXXXXXFXXGGA--PXPPPXGXXRPPXP 213
PPP GG P GGA P PPP G PP P
Sbjct: 666 PPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPP 703
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPP 555
PPPP G A P P G P PP GG PPP
Sbjct: 664 PPPPPGGQAGGAPPPPPPPLPGGAAPPP-------PPPIGGGAPPPPP 704
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Frame = -3
Query: 314 PPPXXG--GG--PXXXXXFXXGGAPXPPPX--GXXRPPXPLXFXG 198
PPP G GG P G AP PPP G PP P F G
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 183 PPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXGPPPXXGGGXP 320
PPP + G P P GG PP PPP GGG P
Sbjct: 664 PPPPPGGQAGGAPPPPPPPLPGGAAPP---------PPPPIGGGAP 700
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 35.5 bits (78), Expect = 0.064
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 666 GXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPPFPXXXTXXGAP 505
G P P P + SPPP G PPP P PP P AP
Sbjct: 163 GPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAP 216
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
P PPPPP + PPP P P GG PP
Sbjct: 108 PTPPPPPRAPETPS-----QAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATG 162
Query: 288 GPPP 299
GPPP
Sbjct: 163 GPPP 166
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/71 (25%), Positives = 18/71 (25%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
PPPP P PPP G P P P
Sbjct: 127 PPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAA 186
Query: 288 GPPPXXGGGXP 320
PPP GG P
Sbjct: 187 SPPPPSGGPPP 197
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
PPPPPPP PPP G P P GG PP
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPP------PGGNAPPPPPPPGGSAPPPGGGAPPL 973
Query: 288 GPPPXXGGGXP 320
PPP GG P
Sbjct: 974 PPPP--GGSAP 982
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 666 GXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPPFP 532
G P G A P G PPP GG PPP P PP P
Sbjct: 950 GNAPPPPPPPGGSAPPPG-GGAPPLPPPPGGSAPPPPPPPPPPPP 993
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPX-PPPXGXXRPPXP 213
PPP GG G AP PPP G PP P
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPP 956
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +3
Query: 111 PPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXG 290
PPPPP PPP G P P GG PP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
Query: 291 PP 296
PP
Sbjct: 993 PP 994
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPP 555
PPPP PG + P P G P G PP G PPP
Sbjct: 933 PPPP----PGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPP 976
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXP 213
PPP G P G P PPP G PP P
Sbjct: 956 PPPPGGSAPPPGG----GAPPLPPPPGGSAPPPP 985
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXX-AXVPXLWGXXXSPPPXGGXXXPPPXPXGPPFP 532
G P P G + P G PPP G PPP PP P
Sbjct: 927 GGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLP 974
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPP 219
PPP G P P PPP G PP
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPP 965
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXP 213
PPP GG G AP PPP P P
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPP 966
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/66 (28%), Positives = 21/66 (31%)
Frame = +2
Query: 188 PXXXPKXXGXXGAXXXPLGGGXGPPXXKXXXXXGAPPXXGGGEXIFFLXXXGXXXXXXPP 367
P P G + P GG PP G+ P GGG G PP
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPPPPG---GSAPPPGGGAPPLPPPPGGSAPPPPPP 987
Query: 368 PXXPXP 385
P P P
Sbjct: 988 PPPPPP 993
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 311 PPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXPLXFXG 198
PP GG P GG+ PPP PP P+ G
Sbjct: 964 PPPGGGAPPLPP--PPGGSAPPPPPPPPPPPPPMRKLG 999
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.5 bits (73), Expect = 0.26
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXPL 210
PPP G P GG P PPP RPP L
Sbjct: 355 PPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSL 389
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Frame = +3
Query: 108 PPPP----PPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXX----PXWGGGWGPP 263
PPPP PPP APPP P + P P G PP
Sbjct: 297 PPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPP 356
Query: 264 XXKXXXXXGPPPXXGGGXP 320
PPP GG P
Sbjct: 357 PVGGAAPPPPPPPPVGGPP 375
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 111 PPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXG 290
PPPPP + PPP G P GG PP G
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGA-APPPPPPPPVGG 373
Query: 291 PPP 299
PPP
Sbjct: 374 PPP 376
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 315 SPPPIXGGAPXXXXFFXXGGPXPPP 241
+PPP+ G AP GGP PPP
Sbjct: 354 APPPVGGAAPPPPPPPPVGGPPPPP 378
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPX-GXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPPXP 549
PPPP + P G P P GG PP + PPP P
Sbjct: 328 PPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPP 378
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -2
Query: 594 SPPPXGGXXXPPPXPX--GPPFPXXXTXXGAP 505
+PPP GG PPP P G P P G P
Sbjct: 354 APPPVGGAAPPPPPPPPVGGPPPPPPPIEGRP 385
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPPXP 549
PPPP G A P P +G P G PP G PPP P
Sbjct: 287 PPPPPSR--GAAPPP---PSRGAPPPPPSRGSAPPPPPARMGTAPPPPPP 331
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 365 GXXNXGGPXFXAKKKWXPPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXP 213
G GP W PPP GGP G P PPP G P P
Sbjct: 192 GVGQHSGPYPGQPGMWGPPPM--GGPPPMGGPPGGYPPPPPPPGAGDPAYP 240
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPP--FPXXXTXXGA 508
G P G G P +WG PPP GG PP GPP +P GA
Sbjct: 186 GGYPPAGVGQHSGPYPGQPGMWG----PPPMGG----PPPMGGPPGGYPPPPPPPGA 234
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.34
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 660 PXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPP 538
P P G P G PPP G PPP GPP
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
Score = 31.9 bits (69), Expect = 0.79
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 618 PXLWGXXXSPPPXGGXXXPPPXPXGPPFPXXXT 520
P G PPP G PPP GPP P T
Sbjct: 379 PPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPT 411
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 591 PPPXGGXXXPPPXPXGPPFPXXXTXXGAP 505
PPP G PPP GPP P T P
Sbjct: 378 PPPTNGPPPPPPPTNGPPPPPPPTNGPPP 406
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPPXP 213
PPP GP G P PPP PP P
Sbjct: 376 PPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPPXPXXP 540
PPPP P P P G P G PP G PPP P
Sbjct: 365 PPPPP---PTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 414
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPPFPXXXTXXGAP 505
G G P + P PPP PPP GPP P T P
Sbjct: 341 GGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
PP PPPP K PPP P GP P PP
Sbjct: 354 PPSPPPPTNNTPPPPPPTNK----PPPPPPPTN-----GPPPPPPPTNGPPPPPPPTNGP 404
Query: 288 GPPPXXGGGXP 320
PPP G P
Sbjct: 405 PPPPPPTNGPP 415
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.7 bits (71), Expect = 0.45
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXGXXRPP 219
PPP G P GGAP PPP PP
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPPPPP 325
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPP 538
G G P P A P PPP GG PPP P PP
Sbjct: 286 GGGAPVPPPPPADGSAPAPP------PPPPPGGAPPPPPPPPPPP 324
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -2
Query: 402 PGXPXLGXGNXGGGXKXXXXPXXXKKKMXSPPPIXGGAPXXXXFFXXGGPXPPPXGXXXA 223
P P + G GG P PPP GGAP P PPP G A
Sbjct: 278 PEVPDIVTG--GGAPVPPPPPADGSAPAPPPPPPPGGAPPPPP-----PPPPPPPGDGGA 330
Query: 222 PXXP 211
P P
Sbjct: 331 PPPP 334
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 591 PPPXGGXXXPPPXPXGPPFP 532
PPP G PPP P PP P
Sbjct: 306 PPPPPGGAPPPPPPPPPPPP 325
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPP-PXXPXKXKGXXGP-XXPXWGGGWGPPXXKXXX 281
PPPPPPP P P P G GP P + G P +
Sbjct: 1662 PPPPPPPAPGPPGPDGPMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRDGP 1721
Query: 282 XXGPPPXXGGGXP 320
P P G G P
Sbjct: 1722 MGPPGPSGGQGPP 1734
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +3
Query: 108 PPPPPPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXX 287
PPPPPP P P P KG G P G+ P
Sbjct: 29 PPPPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAI 88
Query: 288 GPPPXXG 308
GPP G
Sbjct: 89 GPPGLPG 95
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXP-PPXPXGPPFPXXXTXXGAP 505
G GP G V + G P P G P PP P GPP P P
Sbjct: 769 GPNGQPGPPGINGPPGQVGEM-GPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGP 824
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXP-PPXPXGPPFPXXXTXXGAP 505
G GP G + + G P P G P PP P GPP P P
Sbjct: 599 GPNGQPGPPGVNGPPGEIGEI-GPAGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGP 654
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXP-PPXPXGPPFPXXXTXXGAP 505
G GP G + + G P P G P PP P GPP P P
Sbjct: 684 GPNGQPGPPGINGPPGQIGEM-GPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNGP 739
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -2
Query: 672 GXGXPXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXP-PPXPXGPPFP 532
G GP G V + G P P G P PP P GPP P
Sbjct: 854 GPNGQPGPPGINGPPGQVGEM-GPPGLPGPPGPASPPSPPGPPGPPGP 900
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = -2
Query: 402 PGXPXLGXGNXGGGXKXXXXPXXXKKKMXSPPPIXGGAPXXXXFFXXGGPXPPPXGXXXA 223
P P G + G P K+ +PPP P F G P PP A
Sbjct: 250 PPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPA 309
Query: 222 PXXP 211
P P
Sbjct: 310 PPPP 313
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = -2
Query: 402 PGXPXLGXGNXGGGXKXXXXPXXXKKKMXSPPPIXGGAPXXXXFFXXGGPXPPPXGXXXA 223
P P G + G P K+ +PPP P F G P PP A
Sbjct: 162 PPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPA 221
Query: 222 PXXP 211
P P
Sbjct: 222 PPPP 225
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 698 PPPPXXAXPG-XAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXPPPXPXXP 540
PPPP PG P P G GG + PP GG PPP P
Sbjct: 156 PPPPGTQPPGQGGYPGYNQPPPGHYPAPGQPGGYYPPP---GGYQQPPPGGYAP 206
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 102 LXPPPP-PPPXXXXXXXXXXXXKXXXXAPPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXX 278
L PPPP PPP PPP P P P + PP
Sbjct: 160 LYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPN 219
Query: 279 XXXGPPP 299
PPP
Sbjct: 220 PPYPPPP 226
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -2
Query: 660 PXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPX--GPPFPXXXTXXGAPRTN 496
P P P L+ +PPP PPP P PP+P P N
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPN 200
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 183 PPPXXPXKXKGXXGPXXPXWGGGWGPPXXKXXXXXGPPPXXGGGXPFFFCXKXGXXXVXX 362
PPP P +G P P PP G PP P F + G +
Sbjct: 284 PPPHMPPDYRGFPPPNFPPPDFSRPPPNFNDPAFQGRPPPFVRPPPQQFDYQHGRANMDI 343
Query: 363 PPP 371
PPP
Sbjct: 344 PPP 346
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 9/59 (15%)
Frame = -3
Query: 698 PPPPXXAXPGXAXPXGXXPXKG-XXRXXPXFGG----XFXPPXXXGG----MXXPPPXP 549
PPPP P P G P G P GG PP GG M PPP P
Sbjct: 241 PPPPHSMPPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPPP 299
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 695 PPPXXAXPGXAXPXGXXPXKGXXRXXPXFGGXFXPPXXXGGMXXP 561
PPP P P G P +G P G PP GGM P
Sbjct: 217 PPPGMLPPPGGMPPGRMPPQGLPFPPP---GPIPPPPGAGGMRPP 258
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 617 PXFGGXFXPPXXXGGMXXPPPXP 549
P FGG PP GGM PPP P
Sbjct: 647 PFFGG-IPPPPPGGGMFPPPPPP 668
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 225 PXXPXWGGGWGPPXXKXXXXXGPPPXXGGGXP 320
P P +GG PP PPP GGG P
Sbjct: 644 PPNPFFGGIPPPPPGGGMFPPPPPPPPGGGVP 675
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 591 PPPXGGXXXPPPXPXGP 541
PPP GG PPP P P
Sbjct: 654 PPPPGGGMFPPPPPPPP 670
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 591 PPPXGGXXXPPPXPXGPPFP 532
PPP PPP P PPFP
Sbjct: 470 PPPPPPPPPPPPPPPPPPFP 489
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 606 GXXXSPPPXGGXXXPPPXPXGPPFPXXXTXXGAPR 502
G SPPP PPP P PP P + P+
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQ 394
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 95 LNPXXPPPPPP 127
++P PPPPPP
Sbjct: 363 MSPPPPPPPPP 373
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 16/66 (24%), Positives = 16/66 (24%)
Frame = +2
Query: 101 PXXPPPPPPXXXXXXXXXXXXKXXKXXXPPXXXPKXXGXXGAXXXPLGGGXGPPXXKXXX 280
P PPPPPP PP P P PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALR 435
Query: 281 XXGAPP 298
APP
Sbjct: 436 LACAPP 441
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 4.2
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Frame = +3
Query: 99 ILXPPPPPPPXXXXXXXXXXXXKXXXXAPPP-XXPXKXKGXXG-PXXPXWGGGWGPPXXK 272
++ PPPPPPP PPP P + G G P G G P +
Sbjct: 681 MVPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQ 740
Query: 273 ---XXXXXGPPPXXGGGXP 320
G P GG P
Sbjct: 741 PPPPGQLPGQQPGQAGGRP 759
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 660 PXGPXAXKGXXAXVPXLWGXXXSPPPXGGXXXPPPXPXGPPFPXXXTXXGAP 505
P GP + P + PPP G PP P G P P GAP
Sbjct: 2161 PSGPSPLGAPPSVPPPMGAPPSGPPPMGAPPSGPP-PMGTP-PSGHPPMGAP 2210
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 314 PPPXXGGGPXXXXXFXXGGAPXPPPXG 234
PPP GG P GG P PPP G
Sbjct: 198 PPPGPGGIPPPPPPIR-GGVPPPPPMG 223
Score = 26.2 bits (55), Expect(2) = 6.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 225 PXXPXWGGGWGPPXXKXXXXXGPPPXXGGG 314
P P GG PP PPP GGG
Sbjct: 196 PPPPPGPGGIPPPPPPIRGGVPPPPPMGGG 225
Score = 21.0 bits (42), Expect(2) = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 108 PPPPPP 125
PPPPPP
Sbjct: 195 PPPPPP 200
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -2
Query: 591 PPPX--GGXXXPPPXPXGPPFPXXXTXXGAPR 502
PPP GG PPP P G P P G PR
Sbjct: 202 PPPGFPGGAPPPPPPPFGAP-PPPALNGGPPR 232
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 591 PPPXGGXXXPPPXPXGPPFPXXXT 520
PPP PPP P PP P T
Sbjct: 1165 PPPPSSPSPPPPPPPPPPPPTPTT 1188
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.150 0.522
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,300,288
Number of Sequences: 59808
Number of extensions: 352823
Number of successful extensions: 3386
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2824376637
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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