Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K21
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   7.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   7.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   7.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   7.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 95  LISGVRTPCNCVGSRDTQILRIPY 24
           +  GVR+P   +  R+T I++IP+
Sbjct: 633 MFQGVRSPTFHLTVRNTSIIKIPF 656


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 546 AVEAMTDRVCTYSNG 590
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 546 AVEAMTDRVCTYSNG 590
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 546 AVEAMTDRVCTYSNG 590
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 546 AVEAMTDRVCTYSNG 590
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 152 TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 295
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 83  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 130


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 152 TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 295
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 74  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,677
Number of Sequences: 336
Number of extensions: 3936
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)