Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K21
(862 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 135 5e-32
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 37 0.018
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.098
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 34 0.13
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 33 0.39
SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 135 bits (326), Expect = 5e-32
Identities = 55/85 (64%), Positives = 65/85 (76%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICGLGCSGGMPXLTW 683
VRDQG+CGSCWAFGAVEAM+DR C +S G H SAEDLLSCC CG+GC+GG P W
Sbjct: 104 VRDQGACGSCWAFGAVEAMSDRYCIHSEGKVMPHISAEDLLSCCETCGMGCNGGYPESAW 163
Query: 684 EYWKXFGLVSGGSYHSSXGCRPYEI 758
++WK GLV+GG Y S GC+PY+I
Sbjct: 164 DHWKSKGLVTGGQYDSHKGCQPYKI 188
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +1
Query: 265 HPLSDEFINTINLKQNSWKAGRNFPRDTSFAHLKKIMGVIKDEHFATLPIKTHKIDLIAS 444
+PLS E I+ IN +WKAG+NF + +K++ G K LP++ + +
Sbjct: 28 NPLSMEAIDFINSLHTTWKAGKNFAEVYTIEDVKRLCGAKKG---PPLPLRKKLLISMDD 84
Query: 445 LPENFDPRDXWPDCPTL 495
+P++FD R+ WP CPT+
Sbjct: 85 VPDHFDSREQWPHCPTI 101
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGMPXLT 680
V++QG CGSCWAF ++ + + K S ++L+ C G GC GG+
Sbjct: 348 VKNQGQCGSCWAFSTTGSLEGQ--NFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYA 405
Query: 681 WEYWKXFG 704
++Y K G
Sbjct: 406 FKYIKENG 413
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGMPXLT 680
V++QG CGSCWAF A+ + + K S ++L+ C G GC GG+
Sbjct: 130 VKNQGQCGSCWAFSTTGALEGQ--HFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNA 187
Query: 681 WEYWKXFG 704
++Y K G
Sbjct: 188 FQYIKENG 195
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGMPXLT 680
V++QG CGSCWAF ++ + + S ++L+ C G GC GG+
Sbjct: 58 VKNQGQCGSCWAFSTTGSVEGQ--HFRKTGSLVSLSEQNLIDCSGSYGNNGCQGGLMDNA 115
Query: 681 WEYWKXFGLVSGGSYHSSXG 740
+ Y + G + S + G
Sbjct: 116 FRYIESNGGIDTESSYPYLG 135
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHF-HFSAEDLLSCCPICG-LGCSGGMPXL 677
V+DQ CGSCW+FG + T TK+ S ++L+ C G C GG
Sbjct: 655 VKDQAVCGSCWSFGTTGTIEG---TLFLKTKYLTRLSQQNLMDCSWGEGNNACDGGEDFR 711
Query: 678 TWEY-WKXFGLVSGGSYHSSXGCRPY 752
+++Y K G+ + SY G Y
Sbjct: 712 SYQYIMKSGGIATEESYGPYLGADGY 737
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 35.9 bits (79), Expect = 0.042
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGMPXLT 680
V+ QG CGSC+AF AV + G K S + ++ C G GC GG P
Sbjct: 514 VKSQGICGSCYAF-AVAGALEGAHFIQTGLK-LDLSEQQIVDCTWGFGNRGCKGGYPYRA 571
Query: 681 WEY-WKXFGLVSGGSY 725
++ K GL + SY
Sbjct: 572 MQWILKHGGLATEESY 587
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 35.1 bits (77), Expect = 0.074
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 504 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGM--PX 674
VR QG CGSC+A AV A+ + K SA+ ++ C G GC GG
Sbjct: 327 VRGQGICGSCYALAAVGAVEGAYFMKTGKLK--ELSAQQVIDCSWGSGNRGCKGGYYNKA 384
Query: 675 LTWEY 689
++W Y
Sbjct: 385 MSWIY 389
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 34.7 bits (76), Expect = 0.098
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 513 QGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG-LGCSGGMPXLTWEY 689
Q CGSCWAF + ++ + + K S ++L+ C G GC GG+ ++Y
Sbjct: 342 QCQCGSCWAFSSTGSLEGQ--HFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDYAFKY 399
Query: 690 WK 695
K
Sbjct: 400 IK 401
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 522 CGSCWAFGAVEAMTDRVCTYSNGTKH 599
CGSCWA G AM DR+ G H
Sbjct: 78 CGSCWAHGTTSAMADRINILRKGKWH 103
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
Frame = +3
Query: 507 RDQGSCGSCWAF---GAVEA---MTDRVCTYSNGT 593
+ QG+CGSCWAF GAVEA + + C SN T
Sbjct: 147 KGQGTCGSCWAFATAGAVEAAHFIQEGFCKTSNLT 181
>SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 470 SLGSKFSGRLAIKSIL*VFIGRVAKCSSFITPIIFLRCANDVSRGKLRPAFQLFCFRLIV 291
SL + F G I ++ +AK S+ PII+ K R AFQ F F+ ++
Sbjct: 247 SLYASFGGVTTIPKLMSTLPAMLAKTSACYNPIIYF-----FMYSKFRKAFQRFFFKNVI 301
Query: 290 LMNSSE 273
+ +E
Sbjct: 302 TPSQTE 307
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 486 SNVEXXVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCCPICG 647
SN VR++G+CG C F R CT NG+ + P+CG
Sbjct: 1681 SNRTLAVRNEGNCGLCEGFSCDSVPYSR-CTIINGSPTCVCPPSCPNTLDPVCG 1733
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,368,112
Number of Sequences: 59808
Number of extensions: 517108
Number of successful extensions: 1069
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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