Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K15
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1479 + 30428488-30428502,30428619-30428715,30429627-304299...    30   2.1  
03_01_0223 - 1766292-1766442,1767621-1767676,1767798-1767891,176...    29   3.6  
05_04_0204 - 19022329-19023990                                         29   4.8  
06_03_0613 + 22748223-22749513,22750046-22750179,22751066-227513...    28   8.3  

>06_03_1479 +
           30428488-30428502,30428619-30428715,30429627-30429904,
           30430256-30431032,30431254-30431343,30431538-30431605,
           30431696-30431789,30431902-30431961
          Length = 492

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 838 PERIXHXEGXTCRGXVDVLHEIGH 767
           PER+ H  G + +G  +V H+I H
Sbjct: 60  PERVVHARGASAKGFFEVTHDISH 83


>03_01_0223 -
           1766292-1766442,1767621-1767676,1767798-1767891,
           1768004-1768071,1768441-1769585,1770072-1770168,
           1770265-1770279
          Length = 541

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 838 PERIXHXEGXTCRGXVDVLHEIGH 767
           PER+ H  G + +G  +V H+I H
Sbjct: 60  PERVVHARGASAKGFFEVTHDITH 83


>05_04_0204 - 19022329-19023990
          Length = 553

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 290 IEKSCDKYMNVDVVKQFMEMYKMGXLPRGETF 385
           + K CD++  + VVK F +M K G  P   TF
Sbjct: 355 MRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTF 386


>06_03_0613 +
           22748223-22749513,22750046-22750179,22751066-22751309,
           22751401-22751609,22751691-22751740,22751933-22752053,
           22752138-22752383
          Length = 764

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = -1

Query: 435 TRKTLTASSIWSSLVWTKVSPRGSXPILYISMNCLTTSTFMYLSQLFSMLYSLAIS 268
           +R TL +  +W  L   K+    +  +L ++ NCL  +   + S+++S L SL +S
Sbjct: 118 SRLTLASLGVWGELPGAKLHRLQALRVLNLTGNCLYGAVPEHFSRMYS-LQSLVLS 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,886,199
Number of Sequences: 37544
Number of extensions: 374633
Number of successful extensions: 863
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)