Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K14
(960 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.006
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.006
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.13
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 0.31
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 0.32
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.53
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.1
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 30 2.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.6
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPX-PXXPXXXXFXGXXXXGXXXXXPPPPP 533
P P PPP P P PP P P G PPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 29.5 bits (63), Expect(2) = 0.006
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 5/62 (8%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXP-----PPPPPXX 524
P P PPP P P PP P G P PPPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 523 XF 518
F
Sbjct: 334 RF 335
Score = 28.3 bits (60), Expect(2) = 0.006
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P P PPP PP PP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPX-PXXPXXXXFXGXXXXGXXXXXPPPPP 533
P P PPP P P PP P P G PPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 29.5 bits (63), Expect(2) = 0.006
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 5/62 (8%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXP-----PPPPPXX 524
P P PPP P P PP P G P PPPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 523 XF 518
F
Sbjct: 324 RF 325
Score = 28.3 bits (60), Expect(2) = 0.006
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P P PPP PP PP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P P F PPP PPPPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPP 68
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = -3
Query: 658 PPPXPXXXXXXPX----PPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
PPP P P PP P P G G PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPM---GLPAVGAGAPPPPPPPP 656
Score = 26.6 bits (56), Expect(2) = 0.31
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXF 518
PPP P P P + PPPPPP F
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF 620
Score = 25.8 bits (54), Expect(2) = 0.53
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXFF 515
PPP P P P P G PPPPPP F
Sbjct: 577 PPPSSGTRGIAPSRPLPQAPNY----GTPENRPHAVPPPPPPPPPQSF 620
Score = 25.0 bits (52), Expect(2) = 0.53
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P F P PPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPP 638
Score = 25.0 bits (52), Expect(2) = 0.31
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P + PPP PPPPP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPP--PPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = -3
Query: 658 PPPXPXXXXXXPX----PPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
PPP P P PP P P G G PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPM---GLPAVGAGAPPPPPPPP 482
Score = 26.6 bits (56), Expect(2) = 0.32
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXF 518
PPP P P P + PPPPPP F
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF 446
Score = 25.8 bits (54), Expect(2) = 0.54
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXFF 515
PPP P P P P G PPPPPP F
Sbjct: 403 PPPSSGTRGIAPSRPLPQAPNY----GTPENRPHAVPPPPPPPPPQSF 446
Score = 25.0 bits (52), Expect(2) = 0.54
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P F P PPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPP 464
Score = 25.0 bits (52), Expect(2) = 0.32
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P + PPP PPPPP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPP--PPPPP 483
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P LP PPP PPPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPP 522
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPPP 323
P P P P PPP PPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPP 523
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXF 518
PPP P P PP P P G PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP-----------GGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXF 518
PPP P P PP P P G PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP-----------GGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPPXXXF 518
PPP P P PP P P G PPPPPP F
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP-----------GGFKGGPPPPPPPGMF 376
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = -3
Query: 673 GXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXX-GXXXXXPPPPPPXXXFFFF 509
G PPP P PP P P PPPPPP F F
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMF 589
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPP 533
PPP P P PP P P G PPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTM---SKAPTGVPLPVPPPPP 1381
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 658 PPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
PPP P P P P P PPPPPP
Sbjct: 97 PPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 397 PXPXLPFXKXXFXXPPPXXXPPPPP 323
P P PF F PPP PPPPP
Sbjct: 59 PPPAYPFAPQVFTQPPP---PPPPP 80
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 691 FPXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
F P G PPP P P PP G PPPPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPP-------PMMGGIPPPPPMFGAPPPPPP 119
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -3
Query: 403 PXPX-PXLPFXKXXFXXPPPXXXPPPPP 323
P P P P F PPP PPPPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPP 77
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 403 PXPXPXLPFXKXXFXXPPPXXXPPPP 326
P P P P PPP PPPP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPP 93
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
P P PPP P PP P G PPPPPP
Sbjct: 255 PPPPPAAGSPPPPRTGS----PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
P P PPP P PP P G PPPPPP
Sbjct: 276 PPPPPAAGSPPPPRTGS----PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 688 PXXPXGXXXXPPPXPXXXXXXPXPPXPXXPXXXXFXGXXXXGXXXXXPPPPPP 530
P P PPP P PP P G PPPPPP
Sbjct: 261 PPPPPAAGSPPPPRTGS----PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.148 0.485
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,101,032
Number of Sequences: 27780
Number of extensions: 201153
Number of successful extensions: 1813
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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