BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_K13 (900 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.032 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.055 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.073 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.097 SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39 SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.52 SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.68 SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.6 SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 6.3 >SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||Manual Length = 1461 Score = 39.5 bits (88), Expect = 6e-04 Identities = 20/51 (39%), Positives = 21/51 (41%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P P P P+P P P P P PPPP P P PPPPP Sbjct: 737 PAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783 Score = 25.8 bits (54), Expect = 8.4 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%) Frame = +2 Query: 710 PPXXXXXXPXRFP-PXXXPPXXPX---PVPXPCPXYPXTXXXPFPPPP 841 PP P P P PP P P P P P P PPPP Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 33.9 bits (74), Expect = 0.032 Identities = 16/49 (32%), Positives = 16/49 (32%) Frame = +2 Query: 749 PXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 P PP P P P P PP P P P PPPP Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734 Score = 27.1 bits (57), Expect = 3.6 Identities = 13/38 (34%), Positives = 14/38 (36%) Frame = +2 Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXP 874 PP P VP P P P PPP +P P Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 33.1 bits (72), Expect = 0.055 Identities = 20/63 (31%), Positives = 21/63 (33%) Frame = +2 Query: 710 PPXXXXXXPXRFPPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPP 889 PP P PP PP P P P P P PP +P P P Sbjct: 420 PPSLPPSAPPSLPPSA-PPSLPMGAPAAPPLPPSA---PIAPPLPAGMPAAPPLPPAAPA 475 Query: 890 PPP 898 PPP Sbjct: 476 PPP 478 Score = 28.7 bits (61), Expect = 1.2 Identities = 16/50 (32%), Positives = 17/50 (34%) Frame = +2 Query: 749 PXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP PV P T P PPP + PPPPP Sbjct: 267 PPNSPPRPIAPVSMN-PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP 315 Score = 27.9 bits (59), Expect = 2.1 Identities = 20/79 (25%), Positives = 20/79 (25%), Gaps = 2/79 (2%) Frame = +2 Query: 668 PSPQXHXQVXXWXXPPXXXXXXPXRFPPXXXP--PXXPXPVPXPCPXYPXTXXXPFPPPP 841 P P PP PP P P P P T P P PP Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421 Query: 842 GNXXXPSPXXPXXXPPPPP 898 P P PP P Sbjct: 422 SLPPSAPPSLPPSAPPSLP 440 Score = 27.1 bits (57), Expect = 3.6 Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 4/55 (7%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPP--GNXXXPSPXXP--XXXPPPPP 898 PP PP P P PPPP N P P PPPPP Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365 Score = 26.2 bits (55), Expect = 6.3 Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXPCPXYP-XTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP P P P P P P PP P P PP PP Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 32.7 bits (71), Expect = 0.073 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP P PVP P P P P PP + P P PP PP Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212 Score = 30.3 bits (65), Expect = 0.39 Identities = 17/50 (34%), Positives = 17/50 (34%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 PP P PVP P P P PPP P P PPP Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVP-----PVPPPSEAPPVPKPSVGVPPVPPP 1213 Score = 29.9 bits (64), Expect = 0.52 Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 3/58 (5%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP P PVP P P P P P P P P P P P Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145 Score = 29.5 bits (63), Expect = 0.68 Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%) Frame = +2 Query: 749 PXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 P PP PVP P P P P P P P P PP P Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240 Score = 28.3 bits (60), Expect = 1.6 Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 PP P P PVP P P P P P P P P PP P Sbjct: 1131 PPVPVPSGAP-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182 Score = 27.9 bits (59), Expect = 2.1 Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 PP P P PVP P P P P P P P P P P P Sbjct: 1112 PPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164 Score = 27.9 bits (59), Expect = 2.1 Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 4/58 (6%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 P PP P PVP P P P P P P G P P P P Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174 Score = 27.9 bits (59), Expect = 2.1 Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 4/59 (6%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP P PVP P P P P P P + P P PP PP Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV-PAPSSGIPPVPKPAAGVPPVPP 1193 Score = 27.9 bits (59), Expect = 2.1 Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%) Frame = +2 Query: 746 PPXXXPPXX--PXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 PP P P P P P P P PP + P P PP P Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230 Score = 27.1 bits (57), Expect = 3.6 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 5/55 (9%) Frame = +2 Query: 746 PPXXXPPXXPX-PVPXPCPXYPXTXXX-PFPPPP---GNXXXPSPXXPXXXPPPP 895 PP P P P+P P P + P PPP + PS P PP P Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086 Score = 27.1 bits (57), Expect = 3.6 Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%) Frame = +2 Query: 734 PXRFPPXXXPPXXPXPVPXPCPXYPXT--XXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P PP P P PVP P P PP P P P PP P Sbjct: 1079 PSGAPPVPAPSGIP-PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134 Score = 26.6 bits (56), Expect = 4.8 Identities = 14/49 (28%), Positives = 17/49 (34%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPP 892 PP P P+P P P PP P + +P P P P Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG-APSAPPPVPAP 1069 Score = 26.2 bits (55), Expect = 6.3 Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%) Frame = +2 Query: 713 PXXXXXXPXRFPPXXXPPXXPXPVPXP--CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXP 886 P P PP P +P P P P P P P P P P Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112 Query: 887 PPP 895 P P Sbjct: 1113 PVP 1115 Score = 26.2 bits (55), Expect = 6.3 Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 4/54 (7%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 PP P PVP P P P P P P G P P P P Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 32.3 bits (70), Expect = 0.097 Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Frame = +2 Query: 668 PSPQXHXQVXXWXXP-PXXXXXXPXRFPPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPG 844 P+PQ + P P P PP P P+P P P P PP Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPI---PSKAPPIPSSLPP-PAQPAAPVKSPPS 186 Query: 845 NXXXPS--PXXPXXXPPPP 895 PS P P PPPP Sbjct: 187 APSLPSAVPPMPPKVPPPP 205 Score = 28.7 bits (61), Expect = 1.2 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 3/53 (5%) Frame = +2 Query: 749 PXXXPPXXPX--PVPXPCPXYPXTXXXPFPPPPGNXXXPS-PXXPXXXPPPPP 898 P PP P+P P P + P P PS P P PP PP Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199 Score = 27.1 bits (57), Expect = 3.6 Identities = 14/45 (31%), Positives = 15/45 (33%) Frame = +2 Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895 PP P P P T P P P +P P PP P Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168 Score = 26.2 bits (55), Expect = 6.3 Identities = 15/51 (29%), Positives = 15/51 (29%) Frame = +2 Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 PP P P P P P P P PS P PPP Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174 >SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 2363 Score = 30.3 bits (65), Expect = 0.39 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPG 844 PP P P P P P + P PPPPG Sbjct: 5 PPGNPPPPPPP-PGFEPPSQPPPPPPPG 31 Score = 27.5 bits (58), Expect = 2.7 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = +2 Query: 836 PPGNXXXPSPXX---PXXXPPPPP 898 PPGN P P P PPPPP Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28 >SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 194 Score = 29.9 bits (64), Expect = 0.52 Identities = 22/56 (39%), Positives = 24/56 (42%) Frame = -1 Query: 900 RGGGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733 RGG GG G G F GGG +G G G G+ G GG GG R G Sbjct: 144 RGGRGGSRGGFGGNSRGGF-GGGSRG--------GFGGGSRGGSRGG-FRGGSRGG 189 Score = 26.6 bits (56), Expect = 4.8 Identities = 19/62 (30%), Positives = 21/62 (33%) Frame = -1 Query: 894 GGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXGXXXXXX 715 G G G G GG +G G G G+ G GG GG R G Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG-FGGGSRGGSRGGFRGGSR 187 Query: 714 GG 709 GG Sbjct: 188 GG 189 >SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr 2|||Manual Length = 305 Score = 29.5 bits (63), Expect = 0.68 Identities = 22/56 (39%), Positives = 23/56 (41%) Frame = -1 Query: 900 RGGGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733 RGG GG G G GGG+G G G G G G GG GG R G Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRG-----GARGGGRGGARGGRGG--RGGARGG 56 Score = 28.3 bits (60), Expect = 1.6 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 900 RGGGGGXXXGXXGEGXXXFPGG-GGKGXXXVCG*XGQGXGTGXGXXGGXXXGGK 742 RGG GG G G G GG GG+G G G G G G GG G K Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRG-----GARG-GRGGSSGGRGGAKGGAK 72 Score = 26.2 bits (55), Expect = 6.3 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Frame = -1 Query: 900 RGGGGGXXXGXXG-EGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733 RGG GG G G G GGG+G G G+G G GG + G Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGGRGGSSGGRGGAKGG 70 >SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 331 Score = 27.1 bits (57), Expect = 3.6 Identities = 15/45 (33%), Positives = 15/45 (33%) Frame = +2 Query: 764 PXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898 P P P P P P P P P P P P PP P Sbjct: 99 PEEPLPREPPLPNEP-VPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142 >SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizosaccharomyces pombe|chr 2|||Manual Length = 872 Score = 26.2 bits (55), Expect = 6.3 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +2 Query: 833 PPPGNXXXPSPXXPXXXPPPPP 898 P GN P+P PPPPP Sbjct: 339 PFAGNQVMPTPQVQGSRPPPPP 360 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,778,281 Number of Sequences: 5004 Number of extensions: 22684 Number of successful extensions: 175 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 110 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 454497130 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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