Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K13
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.032
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.055
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.073
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.097
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.52
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.68
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.6
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 6.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P P P P+P P P P P PPPP P P PPPPP
Sbjct: 737 PAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +2
Query: 710 PPXXXXXXPXRFP-PXXXPPXXPX---PVPXPCPXYPXTXXXPFPPPP 841
PP P P P PP P P P P P P PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 749 PXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
P PP P P P P PP P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXP 874
PP P VP P P P PPP +P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.055
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 710 PPXXXXXXPXRFPPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPP 889
PP P PP PP P P P P P PP +P P P
Sbjct: 420 PPSLPPSAPPSLPPSA-PPSLPMGAPAAPPLPPSA---PIAPPLPAGMPAAPPLPPAAPA 475
Query: 890 PPP 898
PPP
Sbjct: 476 PPP 478
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 749 PXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP PV P T P PPP + PPPPP
Sbjct: 267 PPNSPPRPIAPVSMN-PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP 315
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/79 (25%), Positives = 20/79 (25%), Gaps = 2/79 (2%)
Frame = +2
Query: 668 PSPQXHXQVXXWXXPPXXXXXXPXRFPPXXXP--PXXPXPVPXPCPXYPXTXXXPFPPPP 841
P P PP PP P P P P T P P PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 842 GNXXXPSPXXPXXXPPPPP 898
P P PP P
Sbjct: 422 SLPPSAPPSLPPSAPPSLP 440
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPP--GNXXXPSPXXP--XXXPPPPP 898
PP PP P P PPPP N P P PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXPCPXYP-XTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP P P P P P P PP P P PP PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.073
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP P PVP P P P P PP + P P PP PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
PP P PVP P P P PPP P P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVP-----PVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP P PVP P P P P P P P P P P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +2
Query: 749 PXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
P PP PVP P P P P P P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
PP P P PVP P P P P P P P P PP P
Sbjct: 1131 PPVPVPSGAP-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXP---CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
PP P P PVP P P P P P P P P P P P
Sbjct: 1112 PPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
P PP P PVP P P P P P P G P P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP P PVP P P P P P P + P P PP PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV-PAPSSGIPPVPKPAAGVPPVPP 1193
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +2
Query: 746 PPXXXPPXX--PXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
PP P P P P P P P PP + P P PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = +2
Query: 746 PPXXXPPXXPX-PVPXPCPXYPXTXXX-PFPPPP---GNXXXPSPXXPXXXPPPP 895
PP P P P+P P P + P PPP + PS P PP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +2
Query: 734 PXRFPPXXXPPXXPXPVPXPCPXYPXT--XXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P PP P P PVP P P PP P P P PP P
Sbjct: 1079 PSGAPPVPAPSGIP-PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPP 892
PP P P+P P P PP P + +P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG-APSAPPPVPAP 1069
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = +2
Query: 713 PXXXXXXPXRFPPXXXPPXXPXPVPXP--CPXYPXTXXXPFPPPPGNXXXPSPXXPXXXP 886
P P PP P +P P P P P P P P P P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Query: 887 PPP 895
P P
Sbjct: 1113 PVP 1115
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXP--CPXYPX--TXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
PP P PVP P P P P P P G P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.097
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = +2
Query: 668 PSPQXHXQVXXWXXP-PXXXXXXPXRFPPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPG 844
P+PQ + P P P PP P P+P P P P PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPI---PSKAPPIPSSLPP-PAQPAAPVKSPPS 186
Query: 845 NXXXPS--PXXPXXXPPPP 895
PS P P PPPP
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +2
Query: 749 PXXXPPXXPX--PVPXPCPXYPXTXXXPFPPPPGNXXXPS-PXXPXXXPPPPP 898
P PP P+P P P + P P PS P P PP PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPP 895
PP P P P T P P P +P P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 746 PPXXXPPXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
PP P P P P P P P PS P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 761 PPXXPXPVPXPCPXYPXTXXXPFPPPPG 844
PP P P P P P + P PPPPG
Sbjct: 5 PPGNPPPPPPP-PGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +2
Query: 836 PPGNXXXPSPXX---PXXXPPPPP 898
PPGN P P P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.52
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = -1
Query: 900 RGGGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733
RGG GG G G F GGG +G G G G+ G GG GG R G
Sbjct: 144 RGGRGGSRGGFGGNSRGGF-GGGSRG--------GFGGGSRGGSRGG-FRGGSRGG 189
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = -1
Query: 894 GGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXGXXXXXX 715
G G G G GG +G G G G+ G GG GG R G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG-FGGGSRGGSRGGFRGGSR 187
Query: 714 GG 709
GG
Sbjct: 188 GG 189
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.68
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -1
Query: 900 RGGGGGXXXGXXGEGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733
RGG GG G G GGG+G G G G G G GG GG R G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRG-----GARGGGRGGARGGRGG--RGGARGG 56
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 900 RGGGGGXXXGXXGEGXXXFPGG-GGKGXXXVCG*XGQGXGTGXGXXGGXXXGGK 742
RGG GG G G G GG GG+G G G G G G GG G K
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRG-----GARG-GRGGSSGGRGGAKGGAK 72
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 900 RGGGGGXXXGXXG-EGXXXFPGGGGKGXXXVCG*XGQGXGTGXGXXGGXXXGGKRXG 733
RGG GG G G G GGG+G G G+G G GG + G
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 764 PXXPXPVPXPCPXYPXTXXXPFPPPPGNXXXPSPXXPXXXPPPPP 898
P P P P P P P P P P P P PP P
Sbjct: 99 PEEPLPREPPLPNEP-VPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 833 PPPGNXXXPSPXXPXXXPPPPP 898
P GN P+P PPPPP
Sbjct: 339 PFAGNQVMPTPQVQGSRPPPPP 360
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,778,281
Number of Sequences: 5004
Number of extensions: 22684
Number of successful extensions: 175
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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