Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K11
(918 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.24
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 31 1.3
12_02_1070 - 25814741-25815850 31 1.7
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 31 1.7
02_04_0186 + 20754045-20754692,20754772-20755057,20756160-20756668 31 1.7
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115... 30 2.2
06_03_0804 + 24761974-24763196,24763674-24764019 29 3.9
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 29 5.2
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 29 6.8
02_02_0272 - 8452994-8453187,8453850-8454975 29 6.8
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 9.0
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 28 9.0
07_03_0723 + 20954827-20954905,20954974-20956277 28 9.0
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 9.0
06_01_0254 + 1898586-1899617 28 9.0
05_07_0359 - 29539294-29540832,29542366-29542518 28 9.0
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 9.0
04_04_1050 + 30419673-30419789,30419882-30419977,30420180-304202... 28 9.0
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 417 GMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMAL 301
G P R+SP L+ PAEAALS RSL S P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/75 (33%), Positives = 28/75 (37%)
Frame = -1
Query: 429 SPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQGGPG 250
SP P R P SP P T SRA P + A + D L FL R G G
Sbjct: 23 SPLPRSRAPP--SPSPSTSSRAKPRKVAAQPETDEAALDNPDLGPFLLKQARDAMVSGEG 80
Query: 249 GSVRVHCEAAGLSPR 205
G E A + R
Sbjct: 81 GGAARALEFAERAAR 95
>12_02_1070 - 25814741-25815850
Length = 369
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 248 PPGPPXKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFG 427
PP PP P D L+A G FN + S++ + LA + HG + G +
Sbjct: 240 PPPPPPPPPAVAADSPRLNAAGKVVFNGLGRSSSSPSSLAGGRRHHHGRNGGGGIERSYS 299
Query: 428 EQLGVAGKVNL 460
+ VA +N+
Sbjct: 300 AHVRVAPVLNV 310
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 317 ADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 460
A N+R + S AS +A + + HG+ + G P +G AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220
>02_04_0186 + 20754045-20754692,20754772-20755057,20756160-20756668
Length = 480
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 318 ADPMALSTFLSLP-VRGTXQGGPGGS 244
A+P+ S FLS+P +G GGPGGS
Sbjct: 372 AEPILCSLFLSIPDSKGAFYGGPGGS 397
>01_06_0872 +
32609792-32610178,32611262-32611387,32611477-32611550,
32611944-32612013,32612088-32612143,32612236-32612307,
32612384-32612478,32612660-32612726,32612809-32612938,
32613135-32613350,32613461-32613591,32614044-32614218,
32614292-32614382,32614653-32614810,32615059-32615247,
32615551-32615564,32616003-32616228
Length = 758
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 538 GRVGNGAGRVPDRERLGAQXVVVIVEQVDLACDAELLPEAGNAGPGQAQPVPVYVVQSEP 359
GR G G GR R R G + V V +D E+LP A G P + + ++
Sbjct: 44 GRGGRGGGRATGRGRAGGRGRGVPVIDLDPDQPCEVLPGAAIGGVAAGGPHHIEELANKV 103
Query: 358 C---GGSAELVAVVEVGG 314
GGSAE + E G
Sbjct: 104 VKMDGGSAEKIGGGEDDG 121
>06_03_0804 + 24761974-24763196,24763674-24764019
Length = 522
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 242 TEPPGPPXKVPLTGNDKNVLSAIGSADFNDRHKLSAASA 358
++P GPP +P GN K V +A +AD N R + SA
Sbjct: 88 SDPGGPPASLPEVGNKKPV-AAAAAADPNRREFRAVGSA 125
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 445 CDAELLPEAGNAGPGQAQPV 386
C A LLPE GN G GQ+ V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = -1
Query: 390 PCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQGGPGGSVRVHCEAAGL 214
PCPF+ ASPA RS +A + S F RG G G S+ AA L
Sbjct: 15 PCPFSRRPASPARCFAGARRSRCAA--ASASFFSPAGGRGGGDAGAGSSLSSAAAAAAL 71
>02_02_0272 - 8452994-8453187,8453850-8454975
Length = 439
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 402 VRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRG 271
+RL P P +L RA+ A + WR L +ADP L F + RG
Sbjct: 20 LRLPPRPSSLPRAA---AVCARWRRLVTADPAFLRRFRAHHRRG 60
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 405 PVRLSPCPFTLSRASPAEAA 346
P+RLSP P ++SR P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = -1
Query: 435 SCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQGG 256
S +P P R P P P ++ +L+ R+ A SLP+ G G
Sbjct: 545 SATPSPTARTPSPAPPSPIATKTSTSVVLSLAAVRATSPATSSPPRATSSLPLVGAGSSG 604
Query: 255 P 253
P
Sbjct: 605 P 605
>07_03_0723 + 20954827-20954905,20954974-20956277
Length = 460
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 432 CSPKPGMRVPVR-LSPCPFTLSRASPAEAALSLWR 331
CSP P R+P+R + C +ASP + + WR
Sbjct: 62 CSPAPSARIPLRGFTDCRL---KASPGSGSFTRWR 93
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 246 SVRVHCEAAGLSPRTCRHVST 184
S+R+HC A L+PR CR T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421
>06_01_0254 + 1898586-1899617
Length = 343
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 315 DPMALSTFLSLPVRGTXQGGPGG 247
DP LSTFL P G GG GG
Sbjct: 56 DPATLSTFLWNPTGGDDDGGGGG 78
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 438 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQG 259
P KPG P R +P P S +S A AA +L +K + P+R +
Sbjct: 155 PVLEAKPGRGRP-RKNPLPVASSTSSAAAAATALSLRVKRGPGRPRKNAAATPLRLGVKR 213
Query: 258 GPG 250
GPG
Sbjct: 214 GPG 216
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 28.3 bits (60), Expect = 9.0
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +2
Query: 212 DKPAASQ*TRTEPPGPPXKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGLALDNVNGHG 391
D+ AA+ PP PP P GN+ N ++ G+A N +AA A V
Sbjct: 570 DRAAAALAQPPPPPPPPPPPPAAGNNNNNVANAGAAG-NTAGPAAAAPAPSPTLIVR--- 625
Query: 392 LSLTGTRIPGFGEQLGVAGKVNLFH-NNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
+S ++ QL GK L +++ +SA A + A P P T GG V+
Sbjct: 626 VSAAVRKVFDAASQLVALGKSYLVTVSSSSSISAAAATATGNAEAPP--PAGPTAGGDVN 683
>04_04_1050 +
30419673-30419789,30419882-30419977,30420180-30420264,
30420352-30420386,30420479-30420544,30420646-30420686,
30420818-30420933,30421101-30421207,30421354-30421491,
30421610-30421744,30421888-30421998
Length = 348
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 276 RGTXQGGPGGSVRVHCEAAGLS 211
+ T GGP GSVR+ E +GLS
Sbjct: 133 KATKSGGPNGSVRLRPENSGLS 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,411,724
Number of Sequences: 37544
Number of extensions: 399907
Number of successful extensions: 1344
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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