Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K11
         (918 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    28   0.34 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   7.4  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.8  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 28.3 bits (60), Expect = 0.34
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 200 HVRGDKPAASQ*TRTEPPGPPXKVPLTGNDKNVLSAIGSAD 322
           H   D+PA S+ T   PPGPP +  + G +++    +   D
Sbjct: 699 HYLNDRPAGSELT---PPGPPDEKDVCGENEDNFDVVRDTD 736


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 540 TSTRWAGEWTTCSNRRWAHR 599
           T  RW  EW    + RW +R
Sbjct: 850 TMERWQREWDESVHGRWTYR 869


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 245 EPPGPPXKVPLTGNDKNVLSAIGSADFN 328
           EPP P   +PL G D ++ S  G+ D +
Sbjct: 424 EPPLPA--LPLPGGDDDLFSPTGNGDMS 449


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +3

Query: 531 TRPTSTR-WAGEWTTCSNRRWAH 596
           +R  S R W  EW+   N RW +
Sbjct: 903 SRQASMRQWQNEWSNSLNGRWTY 925


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,826
Number of Sequences: 2352
Number of extensions: 13117
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)