Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K11
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein. 34 0.83
AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease ... 34 0.83
AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic se... 34 0.83
AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens ... 33 1.5
AK092355-1|BAC03868.1| 752|Homo sapiens protein ( Homo sapiens ... 32 2.5
Z18284-1|CAA79158.1| 398|Homo sapiens Oct-6 transcription facto... 31 7.7
L26494-1|AAA59965.1| 448|Homo sapiens oct-6 protein. 31 7.7
AL139158-1|CAI23136.1| 451|Homo sapiens POU domain, class 3, tr... 31 7.7
>BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.83
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = -1
Query: 438 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQG 259
P+ +P PG P R SP + +RASPA A+LS S +S+ + S S +
Sbjct: 61 PAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 119
Query: 258 GPGGSVRVHCEAAGLSPRT 202
P G+V + A +P T
Sbjct: 120 TPVGAVPIRSSPARSAPAT 138
>AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease
serine 6 protein.
Length = 558
Score = 33.9 bits (74), Expect = 0.83
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = -1
Query: 438 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQG 259
P+ +P PG P R SP + +RASPA A+LS S +S+ + S S +
Sbjct: 61 PAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 119
Query: 258 GPGGSVRVHCEAAGLSPRT 202
P G+V + A +P T
Sbjct: 120 TPVGAVPIRSSPARSAPAT 138
>AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic
serine protease protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.83
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = -1
Query: 438 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQG 259
P+ +P PG P R SP + +RASPA A+LS S +S+ + S S +
Sbjct: 61 PAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 119
Query: 258 GPGGSVRVHCEAAGLSPRT 202
P G+V + A +P T
Sbjct: 120 TPVGAVPIRSSPARSAPAT 138
>AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
Length = 491
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = -1
Query: 438 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTXQG 259
P PG P + SP + +RASPA A+LS S +S+ + S S +
Sbjct: 65 PPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 124
Query: 258 GPGGSVRVHCEAAGLSPRT 202
P G+V + A +P T
Sbjct: 125 TPVGAVPIRSSPARSAPAT 143
>AK092355-1|BAC03868.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ35036 fis, clone OCBBF2016690, weakly similar to
ZINC FINGER PROTEIN CLONE 647. ).
Length = 752
Score = 32.3 bits (70), Expect = 2.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 294 FLSLPVRGTXQGGPGGSVRVHCEAAGLSPRTCRHVST 184
+ S PVR PG + + +CEA P+TCR T
Sbjct: 209 YRSQPVREHDGSSPGNTGKENCEALAAKPKTCRKPKT 245
>Z18284-1|CAA79158.1| 398|Homo sapiens Oct-6 transcription factor
protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.7
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = -3
Query: 574 HVVHSPAQRVEVGRVGNGAGRVPDRERL---GAQXVVVIVEQVDLA--CDAELLPEAGNA 410
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 36 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 95
Query: 409 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG 314
G Q QP+ +Y + P GG L ++ GG
Sbjct: 96 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 127
>L26494-1|AAA59965.1| 448|Homo sapiens oct-6 protein.
Length = 448
Score = 30.7 bits (66), Expect = 7.7
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = -3
Query: 574 HVVHSPAQRVEVGRVGNGAGRVPDRERL---GAQXVVVIVEQVDLA--CDAELLPEAGNA 410
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 86 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 145
Query: 409 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG 314
G Q QP+ +Y + P GG L ++ GG
Sbjct: 146 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 177
>AL139158-1|CAI23136.1| 451|Homo sapiens POU domain, class 3,
transcription factor 1 protein.
Length = 451
Score = 30.7 bits (66), Expect = 7.7
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = -3
Query: 574 HVVHSPAQRVEVGRVGNGAGRVPDRERL---GAQXVVVIVEQVDLA--CDAELLPEAGNA 410
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 89 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 148
Query: 409 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG 314
G Q QP+ +Y + P GG L ++ GG
Sbjct: 149 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,911,105
Number of Sequences: 237096
Number of extensions: 1936859
Number of successful extensions: 16265
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16246
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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