Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K11
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    29   3.5  
Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2 pro...    28   8.1  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    28   8.1  

>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 541 LQHAGRGSGLHVQTEGGRIVERG 609
           L+HA  G G+HV T G RI +RG
Sbjct: 58  LRHAVDGFGIHVNTVGFRIYDRG 80


>Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical
           protein F11A1.3d protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 457
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 277 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 336

Query: 458 LFHNNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 337 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 373


>Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical
           protein F11A1.3b protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 457
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311

Query: 458 LFHNNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 457
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370

Query: 458 LFHNNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407


>AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2
           protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 457
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311

Query: 458 LFHNNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 457
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370

Query: 458 LFHNNNHXLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 568
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,602
Number of Sequences: 27780
Number of extensions: 286647
Number of successful extensions: 754
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)