Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K09
         (864 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...   124   3e-27
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe...    36   1.7  
UniRef50_Q6CEA1 Cluster: Yarrowia lipolytica chromosome B of str...    34   4.0  
UniRef50_Q0U2Z1 Cluster: Putative uncharacterized protein; n=1; ...    34   5.3  
UniRef50_O23372 Cluster: Probable histone-lysine N-methyltransfe...    34   5.3  
UniRef50_Q7RBK8 Cluster: Similar to macrophage erythroblast atta...    33   7.1  
UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2; ...    33   9.3  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score =  124 bits (299), Expect = 3e-27
 Identities = 78/167 (46%), Positives = 98/167 (58%), Gaps = 6/167 (3%)
 Frame = +2

Query: 119 MAAKFVV-LFACIALAQGAMVRRDAPX---FFKDIEHHTXEFHKTLXQXFNSLTKSKDAQ 286
           MAAKFVV L AC+AL+  AMVRRDAP     F+++E H  EF KT  + FNSL  SK+ Q
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 287 DFIKAWKDGSELRAATAQRLRQESPEERSETRTA--RPRRLWNXXXXXXXXXXXXXXXPT 460
           DF KA KDGS+   +  Q+L   S   +     A  + +                     
Sbjct: 61  DFNKALKDGSD---SVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAH 117

Query: 461 LXVEKNATXLREKLQADVQNTVQESQKLAKKVSSNVQETNEKLAPKI 601
             VEK A   ++KLQA VQ TVQESQKLAK+V+SN++ETN+KLAPKI
Sbjct: 118 PDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKI 164



 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +1

Query: 361 RGALGDANGKAKEALEQSRQNIERTXEELRK 453
           +GA+ DANGKAKEALEQ+RQN+E+T EELRK
Sbjct: 85  QGAISDANGKAKEALEQARQNVEKTAEELRK 115


>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
            Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
            hookeri (Hooker's evening primrose)
          Length = 2434

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 16/81 (19%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +2

Query: 494  EKLQADVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREEHPGG----DQEXPX 661
            EKL+ + +   ++ +KL KKV+ N+++   K+A  +   + +L+++        ++E   
Sbjct: 2089 EKLEKEKRKKERKKEKLKKKVAKNIEKLKNKVAKNVAKNIEKLKKQRAKNIARLEEEDKK 2148

Query: 662  XRQRQAVSVDIELSHLIXISF 724
             R+++   V ++ + ++  +F
Sbjct: 2149 ARKKRKRKVQVQENKILYTAF 2169


>UniRef50_Q6CEA1 Cluster: Yarrowia lipolytica chromosome B of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome B of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 322

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 503 QADVQNTVQES--QKLAKKVSSNVQETNEKLAPKIXGRLRRLREEHP 637
           QADV    Q+   QK A +   +V E  EKLAP+I   L++L E  P
Sbjct: 47  QADVLARYQDKLKQKAAAEGVESVDELKEKLAPEIEATLKKLNESDP 93


>UniRef50_Q0U2Z1 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1184

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = +2

Query: 272 SKDAQDFIKAWKDGSELRAATAQRLRQESPEER 370
           + DA+D   A  DGSEL AAT  RLRQ +  +R
Sbjct: 877 ASDAKDTTDADGDGSELHAATKSRLRQSNKNKR 909


>UniRef50_O23372 Cluster: Probable histone-lysine N-methyltransferase
            ATXR3; n=1; Arabidopsis thaliana|Rep: Probable
            histone-lysine N-methyltransferase ATXR3 - Arabidopsis
            thaliana (Mouse-ear cress)
          Length = 2351

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
 Frame = +2

Query: 71   SPGSHLLRXQISRQYIMAAKFVVLFACIALAQGAMVRRDAPXFFKDIEHHTXEFHK--TL 244
            S G   ++  ISR    A  FV+    +   QG  +   +    KD+      F +  T 
Sbjct: 1379 SHGLRSVKEDISRMCREAINFVIFLLTLLCIQGGGIEGGS----KDMNRIIALFIQLATR 1434

Query: 245  XQXFNSLTKSKDAQDFIKAWKDGSELRAATA--QRLRQESPEERSETRTA 388
             +  + +T S    + +K+W+DGS L +AT   ++L +   E++  +RT+
Sbjct: 1435 LEEVSMITSSYGRDELMKSWQDGSGLSSATKYNKKLSKTVAEKKYMSRTS 1484


>UniRef50_Q7RBK8 Cluster: Similar to macrophage erythroblast
           attacher, putative; n=3; Plasmodium (Vinckeia)|Rep:
           Similar to macrophage erythroblast attacher, putative -
           Plasmodium yoelii yoelii
          Length = 556

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +2

Query: 458 TLXVEKNATXLREKLQADVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 631
           TL +EK    L EK+Q    NT+ E     KK   N ++   ++  K+  RL  + EE
Sbjct: 210 TLFIEKKLLNLNEKMQLTKINTIIEKLNALKKKVINSKKMVSQVIKKLHSRLEYIYEE 267


>UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2;
           Gammaproteobacteria|Rep: Putative uncharacterized
           protein - Pseudomonas putida F1
          Length = 730

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 482 TXLREKLQADVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRL 613
           T LRE LQ  V   V+ES KLA  +S+  +++ + LA ++ G +
Sbjct: 253 TDLREMLQNLVDTQVRESLKLADTLSTTYRDSGQLLADQVSGAI 296


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,255,100
Number of Sequences: 1657284
Number of extensions: 6557568
Number of successful extensions: 25420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25395
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)