Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K09
         (864 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g55510.1 68416.m06164 expressed protein                             32   0.57 
At3g09250.1 68416.m01099 expressed protein                             29   5.3  

>At3g55510.1 68416.m06164 expressed protein
          Length = 594

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 527 QESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREEHPGGDQEXPXXRQR 673
           ++++K AKK   +V++ + KL P I  +  +  E H  GD++     Q+
Sbjct: 6   KKARKFAKKNLQSVEKRSRKLKPFIKKKFAKRNERHQAGDKQEKKVEQQ 54


>At3g09250.1 68416.m01099 expressed protein
          Length = 244

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 506 ADVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREEH 634
           ADV++   +   L + + + VQE N   A KI  +L+ L+E++
Sbjct: 78  ADVESISMDENTLKQDLETAVQEENYVEAAKIRDKLKELQEDN 120


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,763,322
Number of Sequences: 28952
Number of extensions: 143186
Number of successful extensions: 509
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)