Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K08
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   3.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.1  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 168 CCRVLVWSFYQNLECFECAQTVITFGGANGC 76
           CC V+   F     CF CA+ +   G    C
Sbjct: 2   CCAVITRDFAMAAICFSCAEPLEATGCIISC 32


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 478  CSIYYYRHQKHESDPTEEGRXPRIAGQ 398
            C  Y Y H  + +DPTE  R   + G+
Sbjct: 1771 CEGYPYTHTIYGNDPTENKRLQGLPGK 1797


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 156 LVWSFYQNLECFECAQTVITFGGANGCRVXQKIK 55
           +++ F +N+EC E  ++  TF GA    V ++IK
Sbjct: 437 ILYCFCRNVECKELEKSYHTF-GAQIADVDERIK 469


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,494
Number of Sequences: 2352
Number of extensions: 13056
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)