Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K08
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical ...    28   9.9  
AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.16 protein.
          Length = 929

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 328 FDRTTSFDSIDLEELSEPTTTLQPAQQSSXIAPPQWGRIRASDDD 462
           F      D++D E +  PT  +  A  S+ +APP+  R  A D+D
Sbjct: 221 FSSEEEADAVDNELVKWPTLMIVNAFVSNLLAPPKGTRPVAKDED 265


>AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.4 protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 602 DNDHHXSGLNVTWXGHCCXILLHHGVQYL 688
           D+ H  SGL  TW GH   ++   GV+++
Sbjct: 76  DDFHSESGLFATWLGHATVLVDLEGVKFV 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,509,792
Number of Sequences: 27780
Number of extensions: 280699
Number of successful extensions: 625
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)