Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K06
         (1303 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p pro...    36   0.092
AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    36   0.092
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    34   0.49 

>AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p protein.
          Length = 553

 Score = 36.3 bits (80), Expect = 0.092
 Identities = 22/73 (30%), Positives = 26/73 (35%)
 Frame = +1

Query: 1081 SXPRTPKYPPXSXXPXWXPXTXXPXTPDTXPPIRXXVXPXLXXXXHXPGQXSNPAXPXLP 1260
            S P  P+       P   P +  P TP   PP R  V        + P   S PA P  P
Sbjct: 412  STPVRPESGTGIASPQIPPQSPEPETPSEVPPQRPSVQQPWKPVFYSPPTESAPASPNRP 471

Query: 1261 XXXLYPPPXKKPS 1299
               L PP    P+
Sbjct: 472  SITLLPPYGSAPA 484


>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
            protein.
          Length = 625

 Score = 36.3 bits (80), Expect = 0.092
 Identities = 22/73 (30%), Positives = 26/73 (35%)
 Frame = +1

Query: 1081 SXPRTPKYPPXSXXPXWXPXTXXPXTPDTXPPIRXXVXPXLXXXXHXPGQXSNPAXPXLP 1260
            S P  P+       P   P +  P TP   PP R  V        + P   S PA P  P
Sbjct: 484  STPVRPESGTGIASPQIPPQSPEPETPSEVPPQRPSVQQPWKPVFYSPPTESAPASPNRP 543

Query: 1261 XXXLYPPPXKKPS 1299
               L PP    P+
Sbjct: 544  SITLLPPYGSAPA 556


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
            protein.
          Length = 926

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 27/103 (26%), Positives = 31/103 (30%)
 Frame = +1

Query: 991  PXNXXLPPXPLXXXXRSTTRSXXRXXHAATSXPRTPKYPPXSXXPXWXPXTXXPXTPDTX 1170
            P N  LPP  +    R+T R         T  P T   PP        P    P  P T 
Sbjct: 484  PTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPP---PPTRPPTK 540

Query: 1171 PPIRXXVXPXLXXXXHXPGQXSNPAXPXLPXXXLYPPPXKKPS 1299
            PP        +      P     P  P  P     PPP  + S
Sbjct: 541  PPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPTRAS 583



 Score = 30.7 bits (66), Expect = 4.6
 Identities = 27/98 (27%), Positives = 35/98 (35%)
 Frame = +1

Query: 991  PXNXXLPPXPLXXXXRSTTRSXXRXXHAATSXPRTPKYPPXSXXPXWXPXTXXPXTPDTX 1170
            P N  LPP  +    R+T R+  R     T   R P  PP +  P     T  P  P T 
Sbjct: 798  PTNKPLPPVTV----RTTVRTTPRPTLPPT---RPPTKPPTTYLPPPTVRTTRPPPPPTR 850

Query: 1171 PPIRXXVXPXLXXXXHXPGQXSNPAXPXLPXXXLYPPP 1284
            PP +    P          + + P  P      +Y PP
Sbjct: 851  PPTK---PPTTYLPPVTVVRTTRPPPPPTRRTTVYVPP 885



 Score = 30.3 bits (65), Expect = 6.0
 Identities = 25/101 (24%), Positives = 30/101 (29%), Gaps = 5/101 (4%)
 Frame = +1

Query: 1009 PPXPLXXXXRSTTRSXXRXXHAATSXPRTPKYPPXSXXPXWXPXTXXPXT--PDTX---P 1173
            PP P       T +            P  P+ PP +  P   P T  P T  P T    P
Sbjct: 205  PPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLP 264

Query: 1174 PIRXXVXPXLXXXXHXPGQXSNPAXPXLPXXXLYPPPXKKP 1296
            P+   + P        P        P       Y PP  KP
Sbjct: 265  PVTTRLPPPPPSPRTPPPTRPPTRPPTTRPPATYLPPTNKP 305



 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/75 (28%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
 Frame = +1

Query: 1087 PRTPKYPPXSXXPXWXPXTXXPXT--PDTX---PPIRXXVXPXLXXXXHXPGQXSNPAXP 1251
            P +P+ PP +  P   P T  P T  P T    PP+   + P        P        P
Sbjct: 274  PPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPP 333

Query: 1252 XLPXXXLYPPPXKKP 1296
                   Y PP  KP
Sbjct: 334  TTRPPATYLPPTNKP 348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,553,559
Number of Sequences: 53049
Number of extensions: 266426
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7049094330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)