Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K04
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z75710-7|CAN99690.1|  855|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z75710-6|CAB00028.1|  857|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 534 TCSIRSLSSIFCXHGSYXYNGL-RXDDGW 617
           TCS+ S     C HG    NGL + +DGW
Sbjct: 853 TCSVTSCIDSQCTHGHCGTNGLCKCEDGW 881


>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -1

Query: 420 RIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 283
           RI+G       RDG F HF V K +E +Q LG  ++ V H E+F  V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -1

Query: 420 RIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 283
           RI+G       RDG F HF V K +E +Q LG  ++ V H E+F  V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471


>Z75710-7|CAN99690.1|  855|Caenorhabditis elegans Hypothetical
           protein D1081.7b protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = +3

Query: 432 QNSMLRQSL--HEPGNVLIRLLHSY---YPALRHRQLRSTCSIRSLSSIFCXHGSYXYNG 596
           QN +LRQS    +  N  I  + S    +  LRHR ++     ++L+ +   HGS  Y  
Sbjct: 393 QNGILRQSRAQEDDNNTSILTIQSSRRNHSVLRHRTIKPRNPTQNLAEVVKTHGSIPYEA 452

Query: 597 LRXDD 611
           L   D
Sbjct: 453 LSDCD 457


>Z75710-6|CAB00028.1|  857|Caenorhabditis elegans Hypothetical
           protein D1081.7a protein.
          Length = 857

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = +3

Query: 432 QNSMLRQSL--HEPGNVLIRLLHSY---YPALRHRQLRSTCSIRSLSSIFCXHGSYXYNG 596
           QN +LRQS    +  N  I  + S    +  LRHR ++     ++L+ +   HGS  Y  
Sbjct: 395 QNGILRQSRAQEDDNNTSILTIQSSRRNHSVLRHRTIKPRNPTQNLAEVVKTHGSIPYEA 454

Query: 597 LRXDD 611
           L   D
Sbjct: 455 LSDCD 459


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -1

Query: 276 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 136
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -1

Query: 276 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 136
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,425,253
Number of Sequences: 27780
Number of extensions: 317150
Number of successful extensions: 864
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)