Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K03
(846 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 194 3e-48
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 185 1e-45
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 160 5e-38
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 147 3e-34
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 124 2e-27
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 118 2e-25
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 116 1e-24
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 108 1e-22
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 106 6e-22
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 97 4e-19
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 94 3e-18
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 94 5e-18
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 76 1e-12
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 75 2e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 63 1e-08
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 58 4e-07
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 56 1e-06
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 53 1e-05
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 50 6e-05
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 5e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 47 5e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 45 0.002
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 40 0.059
UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila melanogaster|... 36 1.3
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3.9
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 194 bits (472), Expect = 3e-48
Identities = 86/119 (72%), Positives = 100/119 (84%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPGY A +
Sbjct: 129 EFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
FNA+VHRAHIFG HVA+YM SLE++D +SF R F YIKL + A +E IY K H+ I
Sbjct: 189 SFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAI 247
Score = 153 bits (370), Expect = 7e-36
Identities = 67/79 (84%), Positives = 74/79 (93%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHE
Sbjct: 23 RREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YG++VGLTNYAAAY T
Sbjct: 83 LPKYGIQVGLTNYAAAYCT 101
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 185 bits (451), Expect = 1e-45
Identities = 85/119 (71%), Positives = 94/119 (78%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDA S
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
FNAE HRAHIFG HVA+YM +LE +D ++F R F YIKL + A IE IY K H+ I
Sbjct: 158 TFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAI 216
Score = 138 bits (334), Expect = 2e-31
Identities = 60/67 (89%), Positives = 65/67 (97%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHE
Sbjct: 23 RREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHE 82
Query: 353 LPRYGVK 373
LPRYGVK
Sbjct: 83 LPRYGVK 89
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 160 bits (388), Expect = 5e-38
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 4e-36
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 147 bits (357), Expect = 3e-34
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHE
Sbjct: 23 RREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LPRYG+KVGLTNYAAAY+T
Sbjct: 83 LPRYGLKVGLTNYAAAYAT 101
Score = 118 bits (283), Expect = 2e-25
Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +1
Query: 490 EYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXS 666
+YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF G+D S
Sbjct: 129 DYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQES 186
Query: 667 XKFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
++NAE HR I G HVA+YM L+++D D + R F ++ + A + Y K H I
Sbjct: 187 KEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAI 246
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 124 bits (300), Expect = 2e-27
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = +2
Query: 185 KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRY 364
KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+Y
Sbjct: 36 KTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKY 95
Query: 365 GVKVGLTNYAAAYST 409
G+K GLTNYAA Y+T
Sbjct: 96 GMKAGLTNYAATYAT 110
Score = 99.5 bits (237), Expect = 9e-20
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GYD
Sbjct: 138 DYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDK 197
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYI 786
+ + +I G VAEY +++++ + F + F Y+
Sbjct: 198 SHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQHFAKYL 236
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 120 bits (290), Expect = 3e-26
Identities = 57/121 (47%), Positives = 79/121 (65%), Gaps = 3/121 (2%)
Frame = +1
Query: 493 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY---DAX 663
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY +
Sbjct: 79 YHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDEEN 138
Query: 664 SXKFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEX 843
+ ++A+ HR IFG HVA YM L+++D + + + F Y+K + + A+E +Y K HE
Sbjct: 139 NGTYDAQAHRDRIFGAHVASYMEYLKEEDPERYRKQFSAYLKHGLESSALEDMYLKAHEN 198
Query: 844 I 846
I
Sbjct: 199 I 199
Score = 57.2 bits (132), Expect = 5e-07
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 269 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYST 409
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY T
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCT 50
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 118 bits (284), Expect = 2e-25
Identities = 48/79 (60%), Positives = 68/79 (86%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HE
Sbjct: 46 RREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHE 105
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP +G++ GLTNYAAAY+T
Sbjct: 106 LPAFGIEHGLTNYAAAYAT 124
Score = 108 bits (259), Expect = 2e-22
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHIFG 708
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ +A+VHR IFG
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Query: 709 LHVAEYMXSLEQD---DXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
HVA+Y+ ++++ + D F Y+ V +IE +Y K H I
Sbjct: 231 KHVADYLKQVKEEASSNPDEKCVQFSKYMAAKVLPESIEGMYKKAHAAI 279
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 116 bits (278), Expect = 1e-24
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S E
Sbjct: 23 RREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
L R+G+ GLTNYAAAY+T
Sbjct: 83 LKRFGLTSGLTNYAAAYAT 101
Score = 83.0 bits (196), Expect = 9e-15
Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXS---XKFNAEVHRAH 699
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ + K++A VH+
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDR 196
Query: 700 IFGLHVAEYMXSLEQD 747
IFG+HV +YM L+++
Sbjct: 197 IFGVHVDKYMALLQKE 212
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 108 bits (260), Expect = 1e-22
Identities = 51/105 (48%), Positives = 67/105 (63%)
Frame = +1
Query: 532 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHIFGL 711
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E R +I G+
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGI 202
Query: 712 HVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
HVAEYM S++++D D + F Y+K + IE +Y HE I
Sbjct: 203 HVAEYMASMKEEDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKI 247
Score = 108 bits (259), Expect = 2e-22
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDY ARK L++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S E
Sbjct: 23 RREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
L RYG+ VGL NYAAAY+T
Sbjct: 83 LIRYGIPVGLKNYAAAYAT 101
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 106 bits (255), Expect = 6e-22
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +2
Query: 179 EGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 358
+G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL
Sbjct: 314 QGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELK 373
Query: 359 RYGVKVGLTNYAAAYST 409
R+GV GL +YAAAY+T
Sbjct: 374 RFGVSTGLASYAAAYAT 390
Score = 100 bits (240), Expect = 4e-20
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = +1
Query: 493 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY-----D 657
+NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY +
Sbjct: 419 FNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDE 478
Query: 658 AXSXKFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXA--XAIEXIYXK 831
S K+ E H+A IFG H+ YM L+ ++F + F + K A ++E ++ K
Sbjct: 479 GESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSKTLEAAKVDSVEKLFTK 538
Query: 832 XHEXI 846
H I
Sbjct: 539 VHAEI 543
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 97.5 bits (232), Expect = 4e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RRE KTDY R +L+ QDK KY KYRL+ R++N V Q+ + + GD VC A S E
Sbjct: 22 RREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTE 81
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YG+K+GL+NY AAY+T
Sbjct: 82 LPKYGIKLGLSNYPAAYAT 100
Score = 84.2 bits (199), Expect = 4e-15
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 12/118 (10%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR----FPGYDAXSXKFNAEV--- 687
F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R F D + K +V
Sbjct: 136 FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAE 195
Query: 688 -----HRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
++ +I G VA+YM L+++ + + + F Y+K + A ++E IY H I
Sbjct: 196 KIVKGNQYYILGGAVADYMRKLKKESEEKYNKQFSRYVKAGITADSLEKIYKDAHAAI 253
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +1
Query: 550 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHIFGLHVAEYM 729
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ S +FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Query: 730 XSLEQDDXDSFXRXFXXYIKLXVXAXAIEXI 822
L ++D D++ + YIK + +E I
Sbjct: 131 CFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +2
Query: 257 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAY 403
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAY 49
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 93.9 bits (223), Expect = 5e-18
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 493 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH-KPDG 180
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
F+A+ IFG +++EYM L D + + F YIK + I IY + I
Sbjct: 181 SFDAKELHDRIFGYNISEYMKQLRDGDPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKI 239
Score = 84.6 bits (200), Expect = 3e-15
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + ++GD ++ A S E
Sbjct: 17 RREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRE 76
Query: 353 LPRYGVKVGLTNYAAAYST 409
L RYG+ G TNY+AAY+T
Sbjct: 77 LERYGINFGATNYSAAYAT 95
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 322
RR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 34 RRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G +
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLE 741
+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y
Sbjct: 23 RRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKN 82
Query: 353 LPRYGVKVGLTNYAAAY 403
L + K NY +Y
Sbjct: 83 LSKLEYKNLTNNYPFSY 99
Score = 54.0 bits (124), Expect = 5e-06
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNA-EVHRAHIFGLHV 717
+D+GL R T G + F +MKG+VD G+N+PH+ + + + + ++ E+ G+H+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHI 189
Query: 718 AEYMXSLEQDDXDSFXRXF 774
+Y+ L+ +D + + F
Sbjct: 190 IKYIDLLKNEDEEKLKKQF 208
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 57.6 bits (133), Expect = 4e-07
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD ++ AA+S E
Sbjct: 14 RREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRE 66
Query: 353 L-PRYGVKVGLTNYAAAYST 409
L ++G K N AAY T
Sbjct: 67 LIKKFGWKGDGNNTCAAYLT 86
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHI 702
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG + +
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPGDERVRCE---------- 147
Query: 703 FGLHVAEYMXSLEQDDXDSFXRXFXXYI 786
H+A++ +L++++ + + R F Y+
Sbjct: 148 ---HIAQWAEALKEENAELYQRQFSRYL 172
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/79 (40%), Positives = 43/79 (54%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
R EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD + AAYS E
Sbjct: 14 RHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAE 66
Query: 353 LPRYGVKVGLTNYAAAYST 409
L YG + + AAY T
Sbjct: 67 LAGYGYEGSTASTPAAYLT 85
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 648
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +1
Query: 664 SXKFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEX 843
S + +AEVHR +I+G HVA YM L +D+ + + F YIK + IE +Y K H
Sbjct: 5 SKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAA 64
Query: 844 I 846
I
Sbjct: 65 I 65
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 50.4 bits (115), Expect = 6e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +2
Query: 176 REGKTDYYARKRLVVQDKNKYNTPK 250
+EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 43 QEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 648
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 33.9 bits (74), Expect = 5.2
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RR G+TDY R R++ R +VR+SN TCQ+ GD ++ +
Sbjct: 14 RRTGETDYRRRMRMLRGGAT-------RAVVRVSNTQTTCQLINYDSTGDEVIISVTGKT 66
Query: 353 L-PRYGVKVG----------LTNYAAAYSTVCY*HEDCFKDLDLTPYTLAQQMSQVMNTM 499
L R+G + LT +A A + + H + D+ L T ++ + M
Sbjct: 67 LVDRFGWPLDASRKSVPASYLTGFALAKAAIAAGHSEAVLDVGLAAATSGNRVFAALRGM 126
Query: 500 LN 505
++
Sbjct: 127 VD 128
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 47.2 bits (107), Expect = 5e-04
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD + +A+S +
Sbjct: 14 RREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSD 66
Query: 353 LPRYGVKVGLTNYAAAYST 409
L YG + N +AY T
Sbjct: 67 LAEYGWEAPTGNMPSAYLT 85
Score = 41.5 bits (93), Expect = 0.026
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 633
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD +A S E
Sbjct: 14 RREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSE 66
Query: 353 LPRYGVKVGLTNYAAAYST 409
L +YG N AAY T
Sbjct: 67 LAKYGYTGATGNTTAAYLT 85
Score = 41.5 bits (93), Expect = 0.026
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAE 684
LD+GL ++ G+RV+ A+KG VD G +P S FP + + AE
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFPSDERIRGEHIAE 150
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 40.3 bits (90), Expect = 0.059
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHIFGLHVA 720
LD+G+ + G +++ +KGA+D GL +PH+ P + I G H+A
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP-------------EDSRIRGEHIA 149
Query: 721 EYMXSLEQDDXDSFXRXFXXYIK 789
+Y S++ D+ ++ F YI+
Sbjct: 150 QYAESMDDDEKNA---KFANYIR 169
Score = 39.5 bits (88), Expect = 0.10
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKT+Y R +LV DK R++VR+++ Q+ GD + +A S
Sbjct: 14 RREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETLVSATSKN 66
Query: 353 LPRYGVKVGLTNYAAAYST 409
L +G N +AAY T
Sbjct: 67 LKEFGWLGNGKNTSAAYLT 85
>UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila
melanogaster|Rep: IP11866p - Drosophila melanogaster
(Fruit fly)
Length = 540
Score = 35.9 bits (79), Expect = 1.3
Identities = 29/110 (26%), Positives = 40/110 (36%)
Frame = -2
Query: 623 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGXXXXXXXXXXXXXXXXXXXX 444
T RPP +AP P TR P R KP++K P+ST
Sbjct: 262 TPRPPPSAPSRPPTTRKPSAQRIKPSNK------CPISTKSQKLGGAKVLLEIILATKQH 315
Query: 443 XXXXXLRANSRQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 294
N +L +L H+ D S ++V +T + E RPP
Sbjct: 316 ALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPTTKTSERIEKPEPRPP 365
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 34.3 bits (75), Expect = 3.9
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSH 349
+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 9 KEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDK 60
Query: 350 ELPRYGVKVGLTNYAAAY 403
L +YGV + N Y
Sbjct: 61 TLAKYGVDLRGNNIQVCY 78
Score = 33.9 bits (74), Expect = 5.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 648
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,666,286
Number of Sequences: 1657284
Number of extensions: 12675226
Number of successful extensions: 30272
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30246
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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