Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_K03
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 160 5e-39
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 160 7e-39
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 160 7e-39
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 160 7e-39
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 160 7e-39
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 160 7e-39
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 156 1e-37
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 149 1e-35
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 120 9e-27
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 93 9e-19
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 160 bits (389), Expect = 5e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 160 bits (388), Expect = 7e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 151 bits (367), Expect = 2e-36
Identities = 65/79 (82%), Positives = 75/79 (94%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 160 bits (388), Expect = 7e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 160 bits (388), Expect = 7e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 160 bits (388), Expect = 7e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 160 bits (388), Expect = 7e-39
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 189 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 247
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 83 LPKYGVKVGLTNYAAAYCT 101
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 156 bits (378), Expect = 1e-37
Identities = 72/119 (60%), Positives = 88/119 (73%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSX 669
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S
Sbjct: 136 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 195
Query: 670 KFNAEVHRAHIFGLHVAEYMXSLEQDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
+FNAEVHR HI G +VA+YM L ++D D++ + F YIK V +E +Y K H I
Sbjct: 196 EFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSV-TPDMEEMYKKAHAAI 253
Score = 153 bits (372), Expect = 6e-37
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 30 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 89
Query: 353 LPRYGVKVGLTNYAAAYST 409
LP+YGVKVGLTNYAAAY T
Sbjct: 90 LPKYGVKVGLTNYAAAYCT 108
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 149 bits (361), Expect = 1e-35
Identities = 64/76 (84%), Positives = 74/76 (97%)
Frame = +2
Query: 173 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 352
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 353 LPRYGVKVGLTNYAAA 400
LP+YGVKVGLTNYAAA
Sbjct: 83 LPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 120 bits (288), Expect = 9e-27
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = +1
Query: 562 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSXKFNAEVHRAHIFGLHVAEYMXSLE 741
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ S +FNAEVHR HI G +VA+YM L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 742 QDDXDSFXRXFXXYIKLXVXAXAIEXIYXKXHEXI 846
++D D++ + F YIK V +E +Y K H I
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAI 95
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 93.5 bits (222), Expect = 9e-19
Identities = 39/51 (76%), Positives = 48/51 (94%)
Frame = +2
Query: 257 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYST 409
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY T
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCT 51
Score = 85.8 bits (203), Expect = 2e-16
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1
Query: 490 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 630
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 79 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,475,311
Number of Sequences: 237096
Number of extensions: 2096119
Number of successful extensions: 3612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3611
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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