Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_K02
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0595 - 30225747-30226589,30227248-30227386,30228734-30228849     33   0.30 
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356     29   3.7  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    29   4.9  
09_06_0293 + 22086359-22086496,22086604-22087213,22087407-220879...    29   6.5  
02_01_0302 - 2021221-2023305                                           28   8.5  

>02_05_0595 - 30225747-30226589,30227248-30227386,30228734-30228849
          Length = 365

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +2

Query: 386 TRTVTNPRXSHLPTPHPIPEAIARALAYXRGPPPQP 493
           T T TNP  + +P P PI    A ALA    PPP P
Sbjct: 254 TTTTTNPFPTDVPPPAPIFADQAAALASLFAPPPPP 289


>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
          Length = 480

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 479 PPPQPLRSWKEKSSPTC*DKSRQQHTXTXTN 571
           PPP P     EKS+P    KS+++ T T TN
Sbjct: 206 PPPSPELKAGEKSTPPSSHKSKKKMTTTRTN 236


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 265  TPRLKVPSRTSTQNTPPSKLRVPTSTLPLXGQPIDLAYVADENGYQPQGKPSAHPSPNSR 444
            +PR+ +P  +   N P     +P+S  PL   P   A  +++    P   P+  P P +R
Sbjct: 922  SPRM-MPGSSFRMNPPAPLPFIPSSVTPLTQFPGGSAQQSEKRPPPPPPPPNVAPPPFTR 980

Query: 445  GDRP 456
             D P
Sbjct: 981  QDIP 984


>09_06_0293 +
           22086359-22086496,22086604-22087213,22087407-22087938,
           22088617-22089151
          Length = 604

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 487 GGWA-SXVGKSAGDRLGNWVRGG 422
           GGWA    G   GDR+G+W  GG
Sbjct: 438 GGWALGNSGCGGGDRVGHWRHGG 460


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 286 SRTSTQNTPPSKLRVPTSTLPLXGQPIDLAYVADENGYQPQGKPS--AHPSP 435
           S T +  +PPS    P+S  P  G           NG    GKPS  +HPSP
Sbjct: 439 SNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPNG----GKPSTPSHPSP 486


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,156,414
Number of Sequences: 37544
Number of extensions: 225513
Number of successful extensions: 1224
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)