BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J23
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022406-1|AAY54822.1| 134|Drosophila melanogaster IP05494p pro... 33 0.40
BT022394-1|AAY54810.1| 140|Drosophila melanogaster IP05394p pro... 33 0.40
AE014296-1746|AAF50203.2| 120|Drosophila melanogaster CG14167-P... 33 0.40
Y11128-1|CAA72010.1| 403|Drosophila melanogaster C901 protein p... 31 1.6
AE014298-1533|AAF47984.1| 559|Drosophila melanogaster CG1567-PA... 31 1.6
AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p pro... 29 8.5
AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA... 29 8.5
>BT022406-1|AAY54822.1| 134|Drosophila melanogaster IP05494p
protein.
Length = 134
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 359 KWRRVRRQVANXCCLRSXTVAXLIRYCPKAXRS 457
K RR+R V + CCL+S T+ ++RYC R+
Sbjct: 102 KTRRLRDGVFDECCLKSCTMDEVLRYCAAKPRT 134
>BT022394-1|AAY54810.1| 140|Drosophila melanogaster IP05394p
protein.
Length = 140
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 359 KWRRVRRQVANXCCLRSXTVAXLIRYCPKAXRS 457
K RR+R V + CCL+S T+ ++RYC R+
Sbjct: 108 KTRRLRDGVFDECCLKSCTMDEVLRYCAAKPRT 140
>AE014296-1746|AAF50203.2| 120|Drosophila melanogaster CG14167-PA
protein.
Length = 120
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 359 KWRRVRRQVANXCCLRSXTVAXLIRYCPKAXRS 457
K RR+R V + CCL+S T+ ++RYC R+
Sbjct: 88 KTRRLRDGVFDECCLKSCTMDEVLRYCAAKPRT 120
>Y11128-1|CAA72010.1| 403|Drosophila melanogaster C901 protein
protein.
Length = 403
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 247 WRAICCSISLCRRGCTPF-PHCRRTQWC 167
W+ C + +CRRGC P +C+R C
Sbjct: 74 WQGDLCQVPMCRRGCDPMNGYCQRPGEC 101
>AE014298-1533|AAF47984.1| 559|Drosophila melanogaster CG1567-PA
protein.
Length = 559
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 247 WRAICCSISLCRRGCTPF-PHCRRTQWC 167
W+ C + +CRRGC P +C+R C
Sbjct: 74 WQGDLCQVPMCRRGCDPMNGYCQRPGEC 101
>AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p
protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 359 KWRRVRRQVANXCCLRSXTVAXLIRYC 439
K RR RR++A+ CC T ++ YC
Sbjct: 107 KLRRHRRRIAHECCKEGCTYDDILDYC 133
>AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA
protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 359 KWRRVRRQVANXCCLRSXTVAXLIRYC 439
K RR RR++A+ CC T ++ YC
Sbjct: 107 KLRRHRRRIAHECCKEGCTYDDILDYC 133
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,786,669
Number of Sequences: 53049
Number of extensions: 385175
Number of successful extensions: 986
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -