Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J19
(1352 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 40 0.003
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.024
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 37 0.043
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 37 0.043
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 36 0.056
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 35 0.17
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 35 0.17
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 34 0.23
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 34 0.30
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.30
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 34 0.30
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 34 0.30
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.53
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.69
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.69
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.69
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 33 0.69
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 2.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 40.3 bits (90), Expect = 0.003
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP P GC PPPPP
Sbjct: 717 PPPPGCAGLPPPPPSPQPGCAGLPPPPPP 745
Score = 39.9 bits (89), Expect = 0.005
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 627 PPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFF 514
P P PPP PP GC PPPPP K F+
Sbjct: 732 PQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVPMKPLFW 769
Score = 35.5 bits (78), Expect = 0.098
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -3
Query: 630 PPPPXX---FXXXXPPPXPPXGCXFFXPPPP 547
PPPP PPP PP GC PPPP
Sbjct: 700 PPPPLLSGTLPMPPPPPPPPPGCAGLPPPPP 730
Score = 29.9 bits (64), Expect = 4.9
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Frame = -3
Query: 597 PPPXPPX----GCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGXXXKXPXXXX 430
PPP PP G PPPPP PPP G G P
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCA--GLPPPPPSPQP 734
Query: 429 XXXXXXKXPPPXPPXXXGXXKXXP 358
PPP PP G P
Sbjct: 735 GCAGLPPPPPPPPPGCAGLPPPPP 758
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 626 PPPXFFXXXPPPXXPXGGVXFFXPPPPXXXXKKKXFFFXK 507
P P PPP P G PPPP K F+ +
Sbjct: 732 PQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVPMKPLFWKR 771
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 37.5 bits (83), Expect = 0.024
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXF--FXPPPPPXXXXKKXF 520
PPPP + PPP PP + + PPPPP +K +
Sbjct: 53 PPPPRFYDNDIPPPPPPRRGFYDDYPPPPPPPRRDEKSY 91
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -1
Query: 629 PPPPXFFXXX-PPPXXPXGGVXF-FXPPPPXXXXKKKXF 519
PPPP F+ PPP P G + PPPP +K +
Sbjct: 53 PPPPRFYDNDIPPPPPPRRGFYDDYPPPPPPPRRDEKSY 91
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 36.7 bits (81), Expect = 0.043
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP F PPPPP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 33.9 bits (74), Expect = 0.30
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP PP PPPPP
Sbjct: 463 APPPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 36.7 bits (81), Expect = 0.043
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 648 FFXXAXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
FF PPPP PPP PP G P PPP
Sbjct: 648 FFGGIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPP 682
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 624 PPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP F PPP P G PPPPP
Sbjct: 644 PPNPFFGGIPPPPPGGGMFPPPPPPPP 670
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 646 FFXXXXPPPPXFXXXXPPPXXPXG--VXFFFXPPPP 545
FF PPPP PPP P G V PPPP
Sbjct: 648 FFGGIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 36.3 bits (80), Expect = 0.056
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPP 321
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPP PPP PP G PPPPP
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPP 322
Score = 34.3 bits (75), Expect = 0.23
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPP PPP PP G PPPPP
Sbjct: 308 PPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP PP PPPPP
Sbjct: 313 APPPPPP------PPPPPPGDGGAPPPPPPP 337
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP F PPP PP F PPPP
Sbjct: 200 PPPPPGFPGGAPPPPPP---PFGAPPPP 224
Score = 32.3 bits (70), Expect = 0.92
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A P P PPP PP G PPPPP
Sbjct: 185 ANKPSPMAGMPPPPPPPPPPGFPGGAPPPPP 215
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 127 PPPPTSPATRAPPPPPPIAPATGGPPPPP 155
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 140 PPPPIAPATGGPPPPPPIAPATGGPPPPP 168
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP PP PPPPP
Sbjct: 186 ASPPPPSGGPPPPPPPPPP-------PPPPP 209
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 34.3 bits (75), Expect = 0.23
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPP 711
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/93 (25%), Positives = 25/93 (26%), Gaps = 2/93 (2%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXI--FFXPPPRGGXXWGX 457
PPPP PPP PP PPP + PPP G
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGP 374
Query: 456 XXKXPXXXXXXXXXXKXPPPXPPXXXGXXKXXP 358
P PPP PP G P
Sbjct: 375 PPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGP 407
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PP PP PPPPP
Sbjct: 304 APPPPPSR---GSAPPPPPARMGTAPPPPPP 331
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPP-----XGCXFFXPPPPP 544
A PPPP PPP PP PPPPP
Sbjct: 361 AAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPP 396
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PPP PP G PPPP
Sbjct: 678 PPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPP 693
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PP PP PPPPP
Sbjct: 675 APPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPP PPP PP PPPPP
Sbjct: 666 PPPGGQAGGAPPPPPPPLPGGAAPPPPPP 694
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP G PPPPP
Sbjct: 663 PPPPPPGGQAGGAPPPPP 680
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.9 bits (74), Expect = 0.30
Identities = 21/81 (25%), Positives = 25/81 (30%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGXXX 451
PPPP PP PP + PP PP + + PPP +
Sbjct: 103 PPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPP--NPPYPPPL 160
Query: 450 KXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 161 YPPPPNPPPPNAPYPPPPYPP 181
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPS-----PPPPP 393
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP P PPPPP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP P PPP PP PPPPP
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPPP 234
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPP
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 33.1 bits (72), Expect = 0.53
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 648 FFXXAXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
F A PP P PP PP G PPPPP
Sbjct: 172 FMAPAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPP 206
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.7 bits (71), Expect = 0.69
Identities = 24/81 (29%), Positives = 24/81 (29%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGXXX 451
PPPP P P PP G PPPP PPP GG
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPP-----------PPPPPGGSAPPPGG 968
Query: 450 KXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 969 GAPPLPPPPGGSAPPPPPPPP 989
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 32.7 bits (71), Expect = 0.69
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGX 457
A PPPP P P PP PPPPP + PP R G
Sbjct: 316 ATPPPPPPSRDQVPLPPPPLR-GQIAPPPPPISKPPT----STRSAPPPPPGRAPQPLGG 370
Query: 456 XXKXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 371 PPPPPPGRRPPSGKINPPPPPPP 393
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 32.7 bits (71), Expect = 0.69
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGX 457
A PPPP P P PP PPPPP + PP R G
Sbjct: 228 ATPPPPPPSRDQVPLPPPPLR-GQIAPPPPPISKPPT----STRSAPPPPPGRAPQPLGG 282
Query: 456 XXKXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 283 PPPPPPGRRPPSGKINPPPPPPP 305
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 32.7 bits (71), Expect = 0.69
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP P PPPPP
Sbjct: 301 PPPPPPTDFAPPPPPPEPTSELPPPPPPP 329
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP P G PPPPP
Sbjct: 365 PPPPPPTNKPPPPPPPTNG----PPPPPP 389
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTN----GPPPPP 398
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTN----GPPPPP 408
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP P G PPPPP
Sbjct: 385 PPPPPPTNGPPPPPPPTNG----PPPPPP 409
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP P PPPPP
Sbjct: 63 AAPPPPAAAPAAPPPPAAPPAA---PPPPPP 90
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP PP PPPPP
Sbjct: 73 AAPPPPAA-PPAAPPPPPPLPA----PPPPP 98
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 195 PPPPPPGPGGIPPPPPPIRGG--VPPPPP 221
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 1157 PPPPP------PPPPPPPSSPSPPPPPPP 1179
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXP-PXGCXFFXPPPPP 544
PPP PPP P P G PPPPP
Sbjct: 292 PPPFGGHPAAAPPPPPLPAGVPAPPPPPPP 321
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 29.1 bits (62), Expect = 8.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP F PP PP
Sbjct: 8 PPPPPPIAAEFTAPPAPP 25
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.1 bits (62), Expect = 8.6
Identities = 24/93 (25%), Positives = 26/93 (27%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGX 457
A PPP P PP G PPPP K + PPP G
Sbjct: 1208 AIPPPMTNTMTHSAPRPPPMGHHMMNMPPPPPAMPPDG---PPKFMGLPPPPPG------ 1258
Query: 456 XXKXPXXXXXXXXXXKXPPPXPPXXXGXXKXXP 358
P + PP PP G P
Sbjct: 1259 MRPMPPQPPFMPPPPRMQPPGPPGPPGPPGPQP 1291
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.1 bits (62), Expect = 8.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPP 580
PPPP F PPP PP
Sbjct: 425 PPPPPGFPQFQPPPPPP 441
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPX---PPXGCXFFXPPPPPXXXXKK 526
PP P PPP PP PPPPP KK
Sbjct: 215 PPEPDYLEPTPPPPAAPAPPPPPAAAPPPPPPPPPVKK 252
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 627 PPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPP PPP PP PPPPP
Sbjct: 959 PPPIPATQVPPPPLPP-----LPPPPPP 981
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,646,417
Number of Sequences: 59808
Number of extensions: 258670
Number of successful extensions: 1834
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4317916110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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