Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J19
         (1352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.31 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.31
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
 Frame = -3

Query: 597 PPPXPPXGCXFFXPP---PPPXXXXKKXFF 517
           PPP PP G     PP   PPP    +  FF
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPFF 560



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
 Frame = -1

Query: 599 PPPXXPXGGVXFFXPP---PPXXXXKKKXFF 516
           PPP  P GG     PP   PP     +  FF
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFF 560



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -3

Query: 645 FXXAXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
           F    P  P       PPP PP G     PPP P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMG-----PPPSP 597


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 8.8
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +1

Query: 547 GGGGXKKXTPPXGXXGGGXXXKXXGGGG 630
           GGGG     P  G    G      GGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,597
Number of Sequences: 2352
Number of extensions: 7770
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 155649285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)