Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J19
(1352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.022
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.022
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.022
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.27
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 33 0.46
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.81
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.81
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 32 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 1.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 31 1.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 2.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 2.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 2.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 4.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 4.3
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 10.0
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 10.0
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 10.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 10.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.022
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 37.1 bits (82), Expect = 0.028
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 35.5 bits (78), Expect = 0.087
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = -3
Query: 630 PPPPXXF----XXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP GC PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 33.5 bits (73), Expect = 0.35
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP F PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = -3
Query: 630 PPP---PXXFXXXXPPPXPPXGCXFFXPPPPPXXXXK 529
PPP P PPP PP GC PPPPP K
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFK 781
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -3
Query: 630 PPPPXX--FXXXXPPPXPPXGCXFF--XPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP PPP PP G PPPPP PPP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG--- 767
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKK 526
PPPP F PPP PP P P KK
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGVXFFXPPPPXXXXKKK 525
PPPP F PPP P G P P KK
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PPP PP G F P P
Sbjct: 773 PPPPPGGFKGGPPPPPPPG--MFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.022
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 37.1 bits (82), Expect = 0.028
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 35.5 bits (78), Expect = 0.087
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = -3
Query: 630 PPPPXXF----XXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP GC PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 33.5 bits (73), Expect = 0.35
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP F PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = -3
Query: 630 PPP---PXXFXXXXPPPXPPXGCXFFXPPPPPXXXXK 529
PPP P PPP PP GC PPPPP K
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFK 781
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -3
Query: 630 PPPPXX--FXXXXPPPXPPXGCXFF--XPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP PPP PP G PPPPP PPP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG--- 767
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKK 526
PPPP F PPP PP P P KK
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGVXFFXPPPPXXXXKKK 525
PPPP F PPP P G P P KK
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PPP PP G F P P
Sbjct: 773 PPPPPGGFKGGPPPPPPPG--MFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.022
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 37.1 bits (82), Expect = 0.028
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP G PPPPP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 35.5 bits (78), Expect = 0.087
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = -3
Query: 630 PPPPXXF----XXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP GC PPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 33.5 bits (73), Expect = 0.35
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP F PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = -3
Query: 630 PPP---PXXFXXXXPPPXPPXGCXFFXPPPPPXXXXK 529
PPP P PPP PP GC PPPPP K
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFK 364
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -3
Query: 630 PPPPXX--FXXXXPPPXPPXGCXFF--XPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP PPP PP G PPPPP PPP GG
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG--- 350
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 351 --CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKK 526
PPPP F PPP PP P P KK
Sbjct: 357 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGVXFFXPPPPXXXXKKK 525
PPPP F PPP P G P P KK
Sbjct: 357 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PPP PP G F P P
Sbjct: 356 PPPPPGGFKGGPPPPPPPG--MFAPMAP 381
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.27
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP F PPP P G PPPPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMG---GIPPPPP 109
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP F PPP PP G PP P
Sbjct: 105 PPPPPMFGAP-PPPPPPSGLGVAPQPPRP 132
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 645 FXXAXPPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
F PPPP PPP P G PPPPP
Sbjct: 90 FAGGIPPPP-PMMGGIPPPPPMFGAP--PPPPPP 120
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.46
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
P P PPP PP G + PPPPP
Sbjct: 30 PQRPQQCCCPPPPPPPPCGGGYEAPPPPP 58
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.81
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGVXFFXPPPP 546
PPPP PPP P G+ PPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPP 291
Score = 32.3 bits (70), Expect = 0.81
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGXXX 451
PPP P P PP + PPPPP PP R G G
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGG 332
Query: 450 KXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPP 353
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PP PP G PPPPP
Sbjct: 365 PPPPSR------PPAPPSGHGMIPPPPPP 387
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Frame = -1
Query: 635 RXPPPPXFFXXXPPPXXPXG------GVXFFXPPPP 546
R PPPP PPP P G G+ PPPP
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Frame = -1
Query: 629 PPPPXF-----FXXXPPPXXPXGGVXFFXPPPP 546
PPPP PPP P G + PPPP
Sbjct: 336 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PP P G PPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPP 291
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.81
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGVXFFXPPPP 546
PPPP PPP P G+ PPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPP 301
Score = 32.3 bits (70), Expect = 0.81
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXWGXXX 451
PPP P P PP + PPPPP PP R G G
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGG 342
Query: 450 KXPXXXXXXXXXXKXPPPXPP 388
P PPP PP
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPP 363
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PP PP G PPPPP
Sbjct: 375 PPPPSR------PPAPPSGHGMIPPPPPP 397
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Frame = -1
Query: 635 RXPPPPXFFXXXPPPXXPXG------GVXFFXPPPP 546
R PPPP PPP P G G+ PPPP
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Frame = -1
Query: 629 PPPPXF-----FXXXPPPXXPXGGVXFFXPPPP 546
PPPP PPP P G + PPPP
Sbjct: 346 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP PP P G PPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPP 301
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 243 PPPPSPVCM--PPPPPPCPMPIPCPPPPP 269
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP C PPPPP
Sbjct: 57 PPPP--MCPPPPPPPPPPMC---PPPPPP 80
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPP 547
PPPP P P PP F PPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPP 60
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP P PPP PP PPPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPP PPP PP PPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PP PP PPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 29.1 bits (62), Expect = 7.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 629 PPPPXFFXXXPPPXXPXGGV 570
PPPP PPP P GG+
Sbjct: 580 PPPPPMLGGPPPPPPPPGGL 599
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXG 574
PPPP PPP PP G
Sbjct: 579 PPPPPPMLGGPPPPPPPPG 597
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXG 574
PPPP PPP PP G
Sbjct: 580 PPPPPMLGGPPPPPPPPGG 598
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 630 PPPPXX--FXXXXPPPXPPXGCXFFXPPPPPXXXXK 529
PPPP PPP PP PPPPP K
Sbjct: 72 PPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLK 107
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Frame = -3
Query: 636 AXPPPPXX------FXXXXPPPXPPXGCXFFXPPPPP 544
A PPPP PPP PP G PPPPP
Sbjct: 519 APPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP C + P PP
Sbjct: 94 PPPPRN--NCLPPPGPPPPCQQYQQPQPP 120
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP C + P PP
Sbjct: 94 PPPPRN--NCLPPPGPPPPCQQYQQPQPP 120
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP C + P PP
Sbjct: 94 PPPPRN--NCLPPPGPPPPCQQYQQPQPP 120
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP C PPPPP
Sbjct: 66 PPPPIC----PPPPPPPMPC---PPPPPP 87
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -3
Query: 630 PPPPXXFXXXXPPP--XPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP G PPPPP
Sbjct: 236 PPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP G PPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP G PPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPP 239
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 627 PPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP PPP PP PPPPP
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 627 PPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP PPP PP PPPPP
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP P GC PPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPPP 58
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 636 AXPPPPXXFXXXXPPPXPPXGCXFFXPPP 550
A PPP PPP P G + PPP
Sbjct: 39 APPPPVGAGVGYAPPPPRPYGATYAPPPP 67
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPP 481
PPPP PPP PP P P F I PPP
Sbjct: 1345 PPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PPPP PPP PP PPPPP
Sbjct: 1338 PPPPP------PPPPPPSDDLTPVPPPPP 1360
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 5.7
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = -3
Query: 630 PPPPXXFXXXXP----PPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP P PP PP G PPPPP PPPRG
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP--PPPPRGSPPT 309
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXP 391
G PPP P
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 5.7
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = -3
Query: 630 PPPPXXFXXXXP----PPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP P PP PP G PPPPP PPPRG
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP--PPPPRGSPPT 330
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXP 391
G PPP P
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 5.7
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = -3
Query: 630 PPPPXXFXXXXP----PPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXIFFXPPPRGGXXW 463
PPPP P PP PP G PPPPP PPPRG
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP--PPPPRGSPPT 315
Query: 462 GXXXKXPXXXXXXXXXXKXPPPXP 391
G PPP P
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPP 339
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXI--FFXPPP 481
PPPP PPP P F PP F FF PPP
Sbjct: 306 PPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPPXXXXKKXFFFXXKXI--FFXPPP 481
PPPP PPP P F PP F FF PPP
Sbjct: 306 PPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPP 357
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP PPPPP
Sbjct: 492 PPPLPPIATPSSVPPPPP 509
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP P + P P +F PPPPP
Sbjct: 118 PPKPEQYKFPPAPSVPLLHDRYFVPPPPP 146
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 630 PPPPXXFXXXXPPPXPPXGCXFFXPPPPP 544
PP P + P P +F PPPPP
Sbjct: 118 PPKPEQYKFPPAPSVPLLHDRYFVPPPPP 146
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 597 PPPXPPXGCXFFXPPPPP 544
PPP PP PPPPP
Sbjct: 499 PPPLPPIATPSSVPPPPP 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,275,672
Number of Sequences: 27780
Number of extensions: 263213
Number of successful extensions: 1942
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3808844148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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