Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J17
(901 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger re... 33 0.53
U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein... 30 3.8
BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p pro... 30 3.8
BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p pro... 30 3.8
AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein. 30 3.8
AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein. 30 3.8
AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger re... 30 3.8
AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein. 30 3.8
AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein. 30 3.8
AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein. 30 3.8
AY089239-1|AAL89977.1| 319|Drosophila melanogaster AT02809p pro... 30 3.8
AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger re... 30 3.8
AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA ... 30 3.8
AE014134-371|AAN10418.1| 319|Drosophila melanogaster CG31682-PA... 30 3.8
AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein. 30 5.0
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 30 5.0
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 30 5.0
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 30 5.0
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 30 5.0
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 30 5.0
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 30 5.0
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 29 8.7
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 29 8.7
AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p pro... 29 8.7
AE013599-2038|AAM68531.1| 511|Drosophila melanogaster CG8153-PB... 29 8.7
AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA... 29 8.7
AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC... 29 8.7
>AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger
receptor protein.
Length = 574
Score = 33.1 bits (72), Expect = 0.53
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 692
TTE S PP ST +S TRK T ++T T ++TT T
Sbjct: 331 TTEDDISSVPPTVTSTSTSTTRKSTTTTTTTTTTTTTTSTSTTTT 375
>U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein
precursor protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p
protein.
Length = 294
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 53 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 101
>BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p
protein.
Length = 488
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 247 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 295
>AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSVPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 379
>AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 387 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 435
>AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 387 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 435
>AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 387 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 435
>AY089239-1|AAL89977.1| 319|Drosophila melanogaster AT02809p
protein.
Length = 319
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 557 FPNTG-VNFQETFLLVLSLESPNAILLWFCWSINL 456
FP+T + ETF V S + N+ +LW C ++L
Sbjct: 85 FPSTNDITINETFDFVTSFDRRNSAILWMCERVDL 119
>AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger
receptor protein CIprecursor protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA
protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTT 436
>AE014134-371|AAN10418.1| 319|Drosophila melanogaster CG31682-PA
protein.
Length = 319
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 557 FPNTG-VNFQETFLLVLSLESPNAILLWFCWSINL 456
FP+T + ETF V S + N+ +LW C ++L
Sbjct: 85 FPSTNDITINETFDFVTSFDRRNSAILWMCERVDL 119
>AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSVPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 436
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 436
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 436
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 436
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 331 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 379
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 387 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 435
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT----PSNTTGT 692
TTE S PP ST +S TRK T +ST T P+ TT T
Sbjct: 387 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTT 435
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K+P LP ++N R ++MST+D+ +L+ +SD
Sbjct: 919 KPVKKAP-VLPKSVQNLRKDRRVMSTDDEGGSRLNRKTDASD 959
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 692
TTE S PP ST +S TRK T +ST T + T
Sbjct: 388 TTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTT 432
>AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p protein.
Length = 1293
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K+P LP ++N R ++MST+D+ +L+ +SD
Sbjct: 919 KPVKKAP-VLPKSVQNLRKDRRVMSTDDEGGSRLNRKTDASD 959
>AE013599-2038|AAM68531.1| 511|Drosophila melanogaster CG8153-PB,
isoform B protein.
Length = 511
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K+P LP ++N R ++MST+D+ +L+ +SD
Sbjct: 137 KPVKKAP-VLPKSVQNLRKDRRVMSTDDEGGSRLNRKTDASD 177
>AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA,
isoform A protein.
Length = 1293
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K+P LP ++N R ++MST+D+ +L+ +SD
Sbjct: 919 KPVKKAP-VLPKSVQNLRKDRRVMSTDDEGGSRLNRKTDASD 959
>AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC,
isoform C protein.
Length = 1294
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K+P LP ++N R ++MST+D+ +L+ +SD
Sbjct: 920 KPVKKAP-VLPKSVQNLRKDRRVMSTDDEGGSRLNRKTDASD 960
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,123,994
Number of Sequences: 53049
Number of extensions: 741360
Number of successful extensions: 2612
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2612
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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