Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J16
(890 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9; Poaceae... 92 2e-17
UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113; ... 88 3e-16
UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, wh... 83 7e-15
UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=... 79 1e-13
UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130, w... 79 2e-13
UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, wh... 77 6e-13
UniRef50_UPI0001509BE0 Cluster: hypothetical protein TTHERM_0052... 71 4e-11
UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1; Tetr... 68 3e-10
UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S riboso... 60 1e-07
UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome sh... 59 1e-07
UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1; N... 58 3e-07
UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10; Archa... 56 9e-07
UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1; Encepha... 54 6e-06
UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;... 50 6e-05
UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19; Archa... 50 8e-05
UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 47 6e-04
UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum... 46 0.001
UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2; Thermoprote... 45 0.002
UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19; Archa... 42 0.016
UniRef50_O58265 Cluster: Putative uncharacterized protein PH0529... 36 1.0
UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence; n... 34 4.2
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 34 4.2
UniRef50_O94143 Cluster: Putative uncharacterized protein BUD19;... 34 5.6
UniRef50_Q17NR5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q2UHP0 Cluster: Predicted protein; n=3; Aspergillus|Rep... 33 7.4
>UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9;
Poaceae|Rep: 60S ribosomal protein L39 - Zea mays
(Maize)
Length = 51
Score = 92.3 bits (219), Expect = 2e-17
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 231
M +HK F IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113;
Eukaryota|Rep: 60S ribosomal protein L39-like - Homo
sapiens (Human)
Length = 51
Score = 87.8 bits (208), Expect = 3e-16
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
MS+HK F IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 131
Score = 83.4 bits (197), Expect = 7e-15
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 79 FKMSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
FKM AHK +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 78 FKMGAHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 130
>UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=1;
Theileria parva|Rep: 60S ribosomal protein L39, putative
- Theileria parva
Length = 79
Score = 79.4 bits (187), Expect = 1e-13
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = +1
Query: 76 LFKMSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
L+ + + + +K+ L KK+KQNRPIP W R++TGN IRYNAKRR+WRRTKLK+
Sbjct: 26 LYTIGSVRTLTLKKHLGKKMKQNRPIPHWFRLKTGNKIRYNAKRRYWRRTKLKV 79
>UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 137
Score = 78.6 bits (185), Expect = 2e-13
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +1
Query: 76 LFKMSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
L AHK +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 83 LLNQGAHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 136
>UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 93
Score = 77.0 bits (181), Expect = 6e-13
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 91 AHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
AHK +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 44 AHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 92
>UniRef50_UPI0001509BE0 Cluster: hypothetical protein
TTHERM_00526400; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00526400 - Tetrahymena
thermophila SB210
Length = 121
Score = 70.9 bits (166), Expect = 4e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +1
Query: 67 QLDLFKMSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
Q + +M A+K +K++ +K+KQNRP+P W R ++ IRYN+KRR+WRRTKLK+
Sbjct: 64 QEQIKEMGANKTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRTKLKI 120
>UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L39 protein
- Tetrahymena thermophila SB210
Length = 89
Score = 68.1 bits (159), Expect = 3e-10
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +1
Query: 91 AHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
A+K +K++ +K+KQNRP+P W R ++ IRYN+KRR+WRRTKLK+
Sbjct: 40 ANKTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRTKLKI 88
>UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S ribosomal
protein L39; n=2; Catarrhini|Rep: PREDICTED: similar to
60S ribosomal protein L39 - Macaca mulatta
Length = 102
Score = 59.7 bits (138), Expect = 1e-07
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAK 204
MS+ K F IK+ LA+K KQNRPIPQW++M+TG+ IRYN+K
Sbjct: 1 MSSLKTFKIKQFLAQKQKQNRPIPQWIQMKTGDKIRYNSK 40
>UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome
shotgun sequence; n=6; Fungi/Metazoa group|Rep:
Chromosome 1 SCAF14998, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 503
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 88 SAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTI 189
S+HK F IKR LAKK KQNRPIPQW+RM+TGN I
Sbjct: 429 SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKI 462
>UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1;
Neosartorya fischeri NRRL 181|Rep: Ribosomal protein
L39, putative - Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain
ATCC 1020 / DSM 3700 / NRRL 181))
Length = 69
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +1
Query: 91 AHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIR 192
+HK F K+KLAK +QNRPIPQW+R+RTGNTIR
Sbjct: 36 SHKSFRTKQKLAKAQRQNRPIPQWIRLRTGNTIR 69
>UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10;
Archaea|Rep: 50S ribosomal protein L39e - Sulfolobus
acidocaldarius
Length = 51
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
MS HK K +L K LK+N PIP WV ++T IR+N RR+WRR LK+
Sbjct: 1 MSKHKSLGKKLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNLKV 51
>UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L39
- Encephalitozoon cuniculi
Length = 52
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
M + K ++K +L + LK+NR IP W RM + YN RRHWR KLK+
Sbjct: 1 MGSRKTALVKTRLMRALKRNREIPAWKRMMKEHKGEYNRARRHWRSKKLKI 51
>UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L39E - Ignicoccus hospitalis KIN4/I
Length = 55
Score = 50.4 bits (115), Expect = 6e-05
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 91 AHKXFIIKR-KLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLK 234
AH + K+ +L KK KQNR +P WV ++T + N RR+WRR K+K
Sbjct: 5 AHYKHVAKKIRLGKKTKQNRALPAWVILKTRRRVTRNPMRRYWRRQKIK 53
>UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanococcus
jannaschii
Length = 51
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLK 234
M ++K K +LAK LKQNR +P +V ++T +R++ K R+WRR KLK
Sbjct: 1 MGSNKPLGKKVRLAKALKQNRRVPLFVIVKTRGRVRFHPKMRYWRRKKLK 50
>UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 75 FVQNVGP*XVYY*AQIGQKAETKQTHSSVGKDAHRKHYSI*R*EASLEKDKAQVVS 242
F ++VGP A+ QKAE KQTHS+V ++AH KHY + R SLE +A+ VS
Sbjct: 97 FDRDVGPQDFPDQAEACQKAEAKQTHSTVDQNAHWKHYPLQRQAPSLETYEAEAVS 152
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1
Query: 592 SALMNRPPRGERRFAYWAPFRFL 660
+ALMNRP RGERRFAYWA FRFL
Sbjct: 25 AALMNRPTRGERRFAYWALFRFL 47
>UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L39e -
Halorubrum lacusprofundi ATCC 49239
Length = 64
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 112 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 231
K++LAK +QN +P WV M+T + N KRR+WRR L
Sbjct: 23 KKRLAKAERQNTRVPAWVMMKTDMNVTRNPKRRNWRRNDL 62
>UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2;
Thermoprotei|Rep: Ribosomal protein L39 - Cenarchaeum
symbiosum
Length = 52
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 85 MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
M + K K +L KK KQ P+P W+ ++T +R N KRR WR T +++
Sbjct: 1 MGSRKPSGRKIRLQKKTKQAAPVPAWIILKTRRGVRTNPKRRAWRSTDVEV 51
>UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanosarcina
mazei (Methanosarcina frisia)
Length = 51
Score = 42.3 bits (95), Expect = 0.016
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 112 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 231
K++LAK KQN +P W ++T + + +RRHWRR L
Sbjct: 9 KKRLAKAHKQNSRVPVWAIVKTNRKVVSHPRRRHWRRGSL 48
>UniRef50_O58265 Cluster: Putative uncharacterized protein PH0529;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH0529 - Pyrococcus horikoshii
Length = 174
Score = 36.3 bits (80), Expect = 1.0
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = -1
Query: 281 YRVFITLHLTHSQAYNLSFVLLQ*RLLALYRIVFPVRILTH*GMGLFCFSFLANLRLIIN 102
Y +F L HS ++LSFVLLQ L + + V +T G LFCF LA+L
Sbjct: 104 YNLFSGLDHPHSP-HSLSFVLLQCLLFGCVKTLLFVLTITQTGTLLFCFMALASLSFFAR 162
Query: 101 XLWADI 84
L+ I
Sbjct: 163 GLFLAI 168
>UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 567
Score = 34.3 bits (75), Expect = 4.2
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 193 YNAKRRHWRRTKL 231
YNAKRRHWRRTKL
Sbjct: 4 YNAKRRHWRRTKL 16
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 643 PNTQTASPRGXADSLMQ 593
PNTQTASPR ADSLMQ
Sbjct: 332 PNTQTASPRALADSLMQ 348
>UniRef50_O94143 Cluster: Putative uncharacterized protein BUD19;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein BUD19 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 102
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -3
Query: 240 LQLELCPSPVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLM 94
L + L SPV+ LSV+++SV + PL SVL F L+++RL+
Sbjct: 13 LDVHLGSSPVSSLSVVTDSVVGSQSDPLWQWSVLLLSLSHFLLDSERLL 61
>UniRef50_Q17NR5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 175
Score = 33.5 bits (73), Expect = 7.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 288 WTLQGFYYITFNTFTSLQLELCPSPVTPLSVISNSVSCAHPY 163
WTLQG Y + N FT P+P+ P + S S Y
Sbjct: 73 WTLQGIYDVARNEFTDTFTTTTPNPLLPTTTPDPSTSTTEKY 114
>UniRef50_Q2UHP0 Cluster: Predicted protein; n=3; Aspergillus|Rep:
Predicted protein - Aspergillus oryzae
Length = 447
Score = 33.5 bits (73), Expect = 7.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 553 FXFQVXGEVWEVFSALMNRPPRGERRFAYWAPFRFL 660
F GEVW F + PP G RRF P R L
Sbjct: 20 FDHYFMGEVWHPFVSFWADPPEGNRRFVQLPPIRIL 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,756,381
Number of Sequences: 1657284
Number of extensions: 6864260
Number of successful extensions: 19109
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18794
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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