Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J16
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p pro...   100   3e-21
AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA...   100   3e-21
AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal pr...    98   2e-20
BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p pro...    30   4.9  
AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-P...    30   4.9  

>AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p
           protein.
          Length = 51

 Score =  100 bits (239), Expect = 3e-21
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = +1

Query: 85  MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
           M+AHK F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 1   MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA
           protein.
          Length = 51

 Score =  100 bits (239), Expect = 3e-21
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = +1

Query: 85  MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
           M+AHK F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 1   MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal
           protein 46 protein.
          Length = 51

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = +1

Query: 85  MSAHKXFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 237
           M+AHK F IK+KLAKKLKQNR +PQWVR+ TGNTIRYNAKRRHWRRTKLKL
Sbjct: 1   MAAHKSFRIKQKLAKKLKQNRSVPQWVRLATGNTIRYNAKRRHWRRTKLKL 51


>BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p
           protein.
          Length = 1028

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 22  PFYGNPLKILXLCF*QLDLFKMSAHKXFIIKRKLAKKLK 138
           PFY N   +L +CF  L L  +     F+ KRKLA + +
Sbjct: 729 PFYANFKLLLPICFSLLMLLALIGAALFLRKRKLASQAR 767


>AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-PB
            protein.
          Length = 1876

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 22   PFYGNPLKILXLCF*QLDLFKMSAHKXFIIKRKLAKKLK 138
            PFY N   +L +CF  L L  +     F+ KRKLA + +
Sbjct: 1475 PFYANFKLLLPICFSLLMLLALIGAALFLRKRKLASQAR 1513


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,830,791
Number of Sequences: 53049
Number of extensions: 346166
Number of successful extensions: 851
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)