Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J14
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0530 + 3971990-3972331,3972415-3972489,3972608-3972661,397...    29   4.7  

>03_01_0530 +
           3971990-3972331,3972415-3972489,3972608-3972661,
           3972747-3972825,3972927-3973054,3973178-3973261,
           3973344-3973427,3973518-3973669,3973810-3973960,
           3974675-3974746,3975708-3975749
          Length = 420

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 345 TLTANLKPL-RTSLTRLDTMLRGESIPQVASXTS*TSKFPGIDLSNEALIQDCVAKHPP 518
           TL  N +PL R+ LTR        S    +S +S    F G+D  +E L++   A   P
Sbjct: 19  TLLLNARPLLRSRLTRRPFRAVSSSTASPSSSSSGARDFGGVDFGDERLLRCAAAGRAP 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,343,348
Number of Sequences: 37544
Number of extensions: 293923
Number of successful extensions: 706
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)