Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J14
         (849 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)               30   2.1  
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     29   4.8  
SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38)                   29   6.3  
SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)                  28   8.3  
SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)
          Length = 488

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +2

Query: 188 SEFDASPDGAYNYNFETSNGIVRSETGE 271
           +E DA PDG+YN++ ++   +V +ETGE
Sbjct: 218 TEEDAKPDGSYNFDHKS---VVNTETGE 242


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -3

Query: 301 LVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGVEFRPNXLRVXLCRGGSDDGSHKGES 122
           LV  ++S  Q+T+   H A+ + + + V+ + AG +      R+ L R  S  G  + ES
Sbjct: 274 LVKAIQSPTQMTADKLHSALQNKDTLTVARMIAGADPTARFFRMRLARDTSATGVVECES 333

Query: 121 YND 113
            +D
Sbjct: 334 ADD 336


>SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38)
          Length = 903

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   PFLLPPPRASLXYXCXVLSSGPAGT 83
           P LLPP R      C VL  GP+GT
Sbjct: 254 PTLLPPLREGEALACRVLDIGPSGT 278


>SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)
          Length = 599

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +2

Query: 203 SPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVR-GSYSYTNTDGKPETITYF 379
           SP G Y    E +  I R E  +L       +K H ++AVR G Y   + D    T+T+ 
Sbjct: 94  SPSGHYYKVCEPNFFIGRDENLDLTLKSRSVDKKHAVIAVRDGRYELYDMDSLNGTVTHS 153

Query: 380 A 382
           A
Sbjct: 154 A 154


>SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 164

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 193 IRRQPRWSLQLQFRDFQRHRA*RNW*AEGGSRRRQ 297
           +RR+  WS+Q++  +  RH   + W   GG ++R+
Sbjct: 3   VRRKDAWSMQVRQVEHPRHSYVQMWRKFGGPKKRE 37


>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 191 EFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVA 319
           E D+     YNY+    NG+  S+ G+L      DN  HV+ A
Sbjct: 65  EPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNN-HVLNA 106


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,928
Number of Sequences: 59808
Number of extensions: 332436
Number of successful extensions: 816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)