Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J14
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    60   2e-11
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   2.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 33/73 (45%), Positives = 45/73 (61%)
 Frame = +2

Query: 191 EFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGKPETI 370
           + + + DG Y  NFETSNGI   E+G+ K+    DN+  V+   +GS SYT  DG+  +I
Sbjct: 33  QLEVNFDGNYINNFETSNGISHQESGQPKQV---DNETPVVS--QGSDSYTAPDGQQVSI 87

Query: 371 TYFADETGYHAQG 409
           TY ADE G+  QG
Sbjct: 88  TYVADENGFQVQG 100


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 236 TSNGIVRSETGELKEAL 286
           TS G  R  TGE+KEA+
Sbjct: 403 TSKGEYRMSTGEMKEAI 419


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 304 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 197
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 460 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 495


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 304 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 197
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 375 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 410


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 304 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 197
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 694 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 729


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 154 GSDDGSHKGESYNDE 110
           GSD  +HK E  NDE
Sbjct: 310 GSDKENHKTEEPNDE 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,924
Number of Sequences: 438
Number of extensions: 2870
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)